Ll_transcript_515362

• Id Trinity: TRINITY_DN50862_c0_g1_i5
• Name Transcript: Ll_transcript_515362
• Sequence: TTCCGCGTGCAGTCTTCGTAGATCTTGAGCCAACAGTTATCGATGAGGTCAGGACTGGTACTTATCGCCAGCTTTTCCACCCAGAGCAGCTTATCAGCGG TAAAGAAGATGCTGCCAACAACTTTGCCCGTGGCCATTATACCATTGGGAAAGAGATCGTTGATCTGTGCTTGGACCGCATTAGGAAGCTTGCTGATAAC TGCACTGGTCTCCAAGGTTTCTTGGTTTTCAATGCTGTTGGTGGAGGAACTGGTTCTGGTCTCGGTTCTCTTCTGTTGGAGCGTTTGTCTGTTGATTATG GAAAGAAATCAAAGCTTGGGTTCACTGTTTACCCTTCTCCTCAGGTTTCAACTTCTGTTGTTGAGCCATACAACAGTGTCCTCTCTACCCACTCCCTCCT AGAGCACACTGATGTATCTATTCTGTTGGACAATGAAGCTATCTATGACATTTGTAGGCGCTCTCTTGACATTGAGCGTCCCACATACACCAACCTCAAC CGTCTTGTTTCTCAGGTAACCTTTCATTGAATAGGTTCACTGATTTTTCATAATTCTGATTATGCATTCTGTTATTAATAATAGCATCTTGATTTTAATA ATAAAATTATCAATCTTATATTTGTGATTAAGTCAAAGATGACGGTTTTACTGAATGTGTTGTAAAAGTCAAACCAAGGCTTGGTTGTATCATTTTGATG TACACTATGATGTATTGATGTTTATATTTGTTTGGGTTTCAGGTGATTTCTTCATTGACTGCTTCACTGAGGTTTGATGGTGCCCTCAATGTGGATGTGA CTGAATTCCAGACCAACTTGGTCCCATATCCTAGAATCCACTTTATGCTTTCTTCCTACGCACCAGTCATCTCTGCTGAAAAGGCTTACCATGAACAACT CTCAGTTGCTGAAATCACCAACAGTGCTTTTGAGCCTTCATCTATGATGGCCAAGTGTGATCCTCGCCATGGAAAGTACATGGCATGTTGTCTGATGTAT CGTGGTGATGTCGTCCCCAAAGATGTTAATGCTGCTGTTGGCACCATAAAGACCAAGCGCACCATTCAATTCGTTGATTGGTGTCCTACTGGTTTCAAGT GTGGTATTAACTACCAACCACCTACTGTTGTTCCTGGTGGTGACCTTGCCAAGGTGCAGAGGGCAGTGTGCATGATTTCAAACTCAACCAGTGTGGCTGA GGTGTTTTCTCGCATTGACCACAAGTTTGATCTCATGTATGCCAAGCGTGCTTTTGTCCACTGGTATGTGGGTGAGGGTATGGAAGAAGGTGAGTTTTCT GAAGCTCGTGAGGATCTTGCTGCCCTTGAGAAGGATTATGAAGAAGTTGGTGCTGAGTCTGCTGAAGGTGGTGATGATGACATTGAAGACTACTAGAGTC TGTCAGATTCTTGTGCTCTTTTGTTTCTTGTATCGCTTTTTCTCTATTAAGTGCCCTGTTCAGATTCTACCAGAACTACGCTGTTGTGGTTTGTTTGTAT GCACTGTTTTGATGCTCCCTCCTTGTTTCTGAAATACTGATGATGACATCTTGATAAATTATCTTTTGTTTCGTATTTTCTGTGAAAATATTTTTAAGGT TAAACAAAATAATACGTATGTCATATACGTTTACTAGTCAATAACATACGTAGTATGAGAATATATACTATTCTTTATGTTTTTGTGTGGCTGTTGTATG ACTACTTTTTCCAAAAATTTAAGTTGAACTTTTTAGATTTTAAAA
• Tissue: pods
• Gene name: LI_gene_180544;
• Additional information: details;

Expression of Ll_transcript_515362

FPKM

• PAB: 0.3
• PNAB: 2.5
• PS1: 1.5
• PS2: 0
• PS3: 1.3
• PW1: 0
• PW2: 0
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515362

• Blastp: Tubulin alpha chain from Prunus with 97.27% of identity
• Blastx: Tubulin alpha chain from Prunus with 97.71% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427961.1)
• Pfam: Tubulin C-terminal domain (PF03953.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;