Ll_transcript_515360

• Id Trinity: TRINITY_DN50862_c0_g4_i1
• Name Transcript: Ll_transcript_515360
• Sequence: CTGTGGCCACCATCAAGACCAAGCGCACCATTCAATTTGTGGATTGGTGCCCAACTGGGTTCAAGTGTGGTATCAATTATCAGCCTCCTACTGTTGTCCC TGGTGGTGACCTTGCTAAGGTGCAGAGGGCTGTTTGCATGATTTCTAACTCTACCAGTGTTGCTGAAGTGTTCTCCAGAATTGATCATAAGTTTGATCTT ATGTATGCAAAGCGTGCTTTCGTGCATTGGTATGTTGGTGAGGGAATGGAAGAGGGTGAGTTTTCTGAGGCTCGTGAGGATCTCGCTGCTCTCGAGAAGG ATTACGAGGAGGTTGGTGCTGAGTCCGGTGAGGGAGAGGAAGGTGAAGGAGACGATGACTATTAGACTGGATTTTTAATGTAATATATGATGTGTTTCCT GTTAATGTTCTTTTGCTTTTCATTTGGACAGATATGTTTTTTACTCGTGGATGTTTTGTCTGTGATCAATGTCTGTACCTTCTGTAGCACAAAATGTTCC CATTCAAATATCATATGATATGAACGCTTTATGGGCTTTATCTTGTGCTTGTGTTAAAAAACCAAACATCATTAGCTGTGCAG
• Tissue: pods
• Gene name: LI_gene_180547;
• Additional information: details;

Expression of Ll_transcript_515360

FPKM

• PAB: 6.5
• PNAB: 11
• PS1: 4.7
• PS2: 5.6
• PS3: 15.1
• PW1: 11.2
• PW2: 6.1
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515360

• Blastp: Tubulin alpha chain from Prunus with 97.46% of identity
• Blastx: Tubulin alpha-1 chain from Anemia with 100% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427960.1)
• Pfam: Tubulin C-terminal domain (PF03953.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;