| Id Trinity | TRINITY_DN50866_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_514973 |
| Sequence | CAGAGTTATAGCCACGAATTACACTTAGCAAAGTGCAACCAAGAATGCAGAAAATAACAGCAACACTAACTATGTTGACACCATACAAACCATAACTACT AACATGTCTACATTACAATGAAACAACAACATCAACAACAACCTTTTCTTCACTCATGATCACTACCACATGCACAGTTTCATGCAACAACCATGGACCT CACCTTCTTTCTCTTCACTTATCCAAACCACCATTTCCATCTATCAGACTCTTATCTGGGACCCATTATTCTTCTCTTCACTACAAGCCCATTGCATATT CCTCAACAACAATTACACAATGCAAACCCGGAAGCTATTTTTGCAAAGAAGGTGATAACATTAACAACAACAACAACAATAATAATAATATTGTGAATGT TGAAGAAGATGTGTATTGTGAAGTGGAGCTTGTTTCATGGAGGGAAAGAAGAGTTAAGGCTTCTATTTCTATTAATGCTGACATTGATTCTGTTTGGAAT GCTCTTACTGATTATGAACATTTAGCTGATTTTATTCCAAATCTTGTATGGAGTGGGAGAATTCCTTGTCCATATCCTGGGAGGATATGGTTAGAGCAAA GGGGATTTCAAAGGGCCATGTATTGGCACATCGAAGCTCGTGTCGTGTTGGATCTTCAGGAACTTATTAATTCTGAATGGGATCGAGAACTTCGCTTTTC CATGGTTGATGGGGACTTTAAGAAGTTTGAGGGCAAATGGTGTGTAAAATCTGGAACAAGGTCATCAACTACTAATTTATCTTATGAAGTAAATGTGATA CCGAGATTCAATTTCCCAGCTATTTTCCTGGAAAGGATTATTAGATCAGATCTTCCTGTCAACCTCCGCGCCTTGGCATACAGAGTTGATAGAAACATTG TGGGTAATCAGAAACTTTCGCAACCAAAAAACCACTTGCACGAGGCTTCCGTGGCTATTGATGGTTCTCCTTTCAAAGAGATTGATTGTTCATATGTCAA AGAGATAGATGGTGCTTTTTATGAAAGTGATAAATTGCTGCCTGGAGAGAACAAAGAAGCCTTGGCGAGCTCAATTTCTGGTCCTTCGACCACGTCTTCG AGTGAGGTTAACAGCAATTGGGGTGTATTTGGAAAAGTTTGTAGACTTGACAGGCCTTGTGTGGTGGATGAAGTTCATCTCCGCAGATTCGATGGACTTC TGGAAAATGGAGGTGTTCATCGCTGTGTTGTTGCTAGCATAACAGTTAAAGCTCCTGTGCGTGAAGTATGGGATGTTATGTCTTCCTATGAGACTCTTCC TGACATAGTTCCAAATCTAGCAATCAGCAAGATTTTATCACGGGATAACAATAAAGTTCGCATTCTTCAGGAAGGGTGTAAAGGGCTACTTTATATGGTG CTTCACGCCCGTGTTGTGCTACAGTTGTGTGAATATCTAGAACATGAGATCAGTTTTGAACAGGTTGAAGGGGACTTTGACTCGTTCGAGGGGAAATGGG TTTTTGAGCAACTAGGAAATCATCACACATTGTTGAAGTACACCGTGGACTCAAAAATGCGCAAAGATACTTTCCTCTCTGAAGCTATCATGGAAGAGGT CATTTATGAAGATCTCCCGTCAAACTTGTGTGCAATAAGAGATTATGTTGAGAACAGAAATGCATCACATTCTTCGGAAGTTTGTGAGCCGCATACAAAT TCAGTGCAACAAATTATTTCATCCGGATTTAGAGATGACGATGGTTATAGTTCAGATGGTGACTTGTGTAATTGCAATTATCAAGGTTCATCTAAAAAAA GGGCAAGAGTTCCAGGATTGCAGAGGGATATTGAAGTCCTAAAATCTGAACTTCTGAAATTCATTGCTGAACATGGAAAGGAAGGATTTATGCCAATGAG AAAGCAACTTCGTTTGCATGGAAGAGTGGATATCGAGAAGGCTATAACTCGCATGGGTGGATTCAGGACAATTGCAACTATAATGAACCTCTCTTTGGCT TACAAACACCGCAAACCAAAGGGTTACTGGGACAATCTTGAAAATTTGCAGGACGAGATAAGTCGATTTCAAAGGAGCTGGGGTATGGACCCTTCGTCTA TGCCCAGTAGAAAGTCATTTGAGCGTGCAGGGCGATTCGATATTGCACGTGCACTGGAAAAGTGGGGTGGACTTCATGAAGTATCTCGGCTTCTGTCCCT CAAGGCGAGAAGACAACAGAGCAGACAGGTTAACCTTTCTAAGGATAAGAAAACTGATCATATAGTGTCACCAAATGTAGATAGTGAGATCAAGACACCA TTTAGACCCTATATTTCGCAAGATACACAGAAGTGGCTCACAGAACTAAAACAGCTAGACATAAATTGGGTTGAGTAAGAATAAGGATATGTTCATTTTG TTTTAAGCATGCCCATGTCTGTGTTCATAGTCCTATACGATTTTCTAACACTCCATTCACCTTGTTTTCTTGGTTTTCGTTTATCCTTATGTCCAAATTG ACTTGAGGAAATTGCAGAATATTTACCTGCAATTACTAGAAACATTTCACAGATTGTAATTAATTTAAGCCATTTACCGGTTAATTATGCTTACATTTAT TAGTTAGTTTCCCTCTCTTTTCAGAACAAGTGCTATATAATAAACTAATACTGTAATAATCAATTCAGCATTGTTCAGAAATTCATTTACATTTCCTCTC TAGTTTAACATGGTATCAGTAGGGAAGTCCTTTCTCTAGCAACATTCAAGGGCCGGAAACTTCTGCAGTTAGACATCAATAATGCCTTCTTAAATGGTAA TATATTTGAAGAAGTCGTTGTGGACTTACCTCTCCGTGCTACAAGGTTCGGGGAGGCACCTTTTATGAAAGTTACATAAGCAAGTTTATAGTCTCAGGCA AGCTCCAAGGCCCCAGTTCTCTAAATTCTCCTCTGTCTTGACATCAGATGGTTTTCAGCAATCCAAGTATAATCGCTCCTTGTTCGCTGCCGGAACAGGT TCTTTCTTTGTTTCTCTACTTGTCGATGTAGATGATATAACTGTGGCCAGTCCAAACCAAAGCTATCATTTCTCAAGTTCAACAGAAACTGCAGAAATTG TTCAAACTGAAACTTCTAGTCAACTTAAAAGTACTTCTAAAGCCTTGAAATAGCTCAATCCAAGAAAGCAATTAATCTCTCTCGAAGGAATTACACTCTG TAGTTATTAAAGGATACCGGTTTACTAAATAGTAAGCCTAATGAGTTACCTATGGAGCATAACCTCATAATCAACATGACTGATGGAGAACTGGTTCCTA CTGCTTCTCGGTTTCGAAGATCCATTGGAAGGCTACTTTACCATTCAATTTCCAGACGCGATATCTACTTTGCTGTCAATAAATTGAGCCGGTAAATGGC AGCTCTTAGAAGTCCTTGTCTTGACGCTATTCACCCTTTTATCGGATACAAAGATACCCCTGGTCAAGGCTTGTTGTTACCTCTTCTGCCTCCCTCCACA TCAAAGCTTACGCCGATGCAGATTGAGGAGATTGTCCATGGGTCTACCGCAGGTCAATGCGTATTTCTTGGGGGCTGTTCAGTTTCTTGGAAATCAAAGA AACAATGAGTGGTTTATCAATCATTTGCTGAAGCAGAACATAGGGCTTGGGCAATTATCACAATACACAAGTGAGGTCACTAGTCACTTGACTTCAAATA CTTCATTCTATGAATTTTTTTGGAAAATGAATTCATTCTGTCACCTTTTCATTTAAAGGTATAATCAGTATTGCCTAAAGAAAATAAAGCTTACTTGTGG TGTTCATAAAGAACCTTTGTACTATATGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_180593; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514973
| Blastp | - |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 29.58% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000537) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458466.1) |
| Pfam | Polyketide cyclase / dehydrase and lipid transport (PF03364.19) |
| Rfam | - |
| GO | - |