Ll_transcript_514281

• Id Trinity: TRINITY_DN50869_c0_g1_i1
• Name Transcript: Ll_transcript_514281
• Sequence: AAATGACCCAATTTTTCATATCATCAACTATATAGGTCTTCACTAAATTCCCAAAACAAAATTTATCCTGGGCTTCATTCACGAACTCATAACCCATCCA GTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAATTCTTGGCTACTGCCACCAACAAACAAAAGCAC TCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGACGTTCAGCTATGAGAGTTATGATTTATGAAGTT CTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTCGTTCTGATTCGGACCAATCGGTGACGTAAGCTA ATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAACGGAGAAGATAACAGAGAACTATACGCACTCTTG AACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATCACCCTGACAAATACCAAGATTTTCACATGAAAG ATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAGGCAAATATATGATATCTATGGTATGGAAGGCTT GAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGGTTGAGGAAAATGAAGGAACGCCAAAAAATGCTG ACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATGGCCTCTTCAGGGGGGCATAGGAGTAAAAAGTAG ACCTTGTTTGTACTAAAAAGGTGGAAGTGGAACCAAACGGAATAGAGCAGAATACATCCAGCTTCATTGTATTCTGTCCATGGGCCAAACACTACTGTAG AGTTATTGCCTCAGTTTGAAAGCATAAGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCAATTTAGC AGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTACTTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGGTTTACGT TCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCACACTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAATCTTTCAA ATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACATATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGAAGA GAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGGCTGCATA GGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTAGGAATTC AGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCAAAAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGC GTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGAATTTTTGTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAG AAAACTTCTAATCAGGTTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAA CAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGT CATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGGTATGTTTCTTTTCTATTTTTCGCCTACTCCCTAATCAATAAAAT TATTGCAGTAAATATAGGATAAATTGCAGTAACACAGTAAAAGTTTAATAAGTTGGAATAAATCCAAATGCTTCCTTCAAAGATGTAGGGTCAAGGACAT GGTAAGGTTACCTATATATGCATTTGTTGCACTACGTGATTTCTTAAATTACTCTGTTATCTTGGATGAGTAATGAACAATATAACCTTCCTGTGCTTTT AGAGGGAGGCAGCATAGACCTAAGTCAAGAGGTCTCTCAAGTGAGCGAGAATTCCTTCAAATTTTAATAATCTTATACGTTTTTTGACATGATACTACCT GTAAGAAACAACTATTAATAACTAGTAATTAGCACCCAGGACGAGACATATCTTTCACCTGGTTTGATTAATTTATGTATTTAATATTGTTTTTTATCCT TTACACAAATGAGGCAAAGTTCTGTTTAATTTTGTAATTATTACTTGAGTTTATGTGCTTGGCATTTTATGCAAGTTGTGATAGCTCTTATATAACAAAG ATTTGCCATAGATCACCCTTATTCTGTCTGATGAAGCCATCTTGCAACTTTACCAAAATTGAGTCATTGGAATTCACATGGTTTTACCTTTTGAGGCTGC CATGTTTATTCGTAAATAATAGTTGATGAGTCCTATTTATTCTTGATGCAGCTTCATGAGGGTGTTAAAAAATCAGGCATCATGGGTTTTTGTGATCCAT GCCCTGGAGAACTTAAACAATTGTATGTAGAGTACGTTTATGCCGGTAATCAATACAAGGTTTGTGTTGGTGATTTTGAAGAATTGCTGCTACCCCAGGG TACCCACAGGATATAAAGATTATTATATGCATCAGTAACATTGTTACCTCTTGCAGTTTTGCCTGGTTTACATGCGTGAGGTAGGATTTATTCTCTTAGA TTGAATTAGAAAATGTACCTTTTACAATTTTGGGACATTGGTACATTACTTATTTTTGTAATTTATTTTGTTCCCCTCACCACCCCAAAAATGTACGAAA TAAGGGCATTGTAGGAGGTAATGATATTATTTTGTCCAGCTACTAAGCTTTTACATTGTGTAACTCTGGTGCCGGATCCCCACTTTTGATTTTGCTTACT CCTTTGTTTATTGTTGATTCGGTTCCAATTCATACAATAAATTCGTTTTTGGGGCAACATTAGCTTTAAGAATTTTGATATTGCGTTTTCACTTTTTAGT TTCCATTTTGCTTTGTACTTCGCATAATTGACAAGACG
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514281

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.5
• PS3: 0.3
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514281

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 62.68% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 62.39% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: Domain of unknown function (DUF3395) (PF11875.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;