Ll_transcript_514291

• Id Trinity: TRINITY_DN50869_c0_g1_i10
• Name Transcript: Ll_transcript_514291
• Sequence: AAATGACCCAATTTTTCATATCATCAACTATATAGGTCTTCACTAAATTCCCAAAACAAAATTTATCCTGGGCTTCATTCACGAACTCATAACCCATCCA GTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAATTCTTGGCTACTGCCACCAACAAACAAAAGCAC TCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGACGTTCAGCTATGAGAGTTATGATTTATGAAGTT CTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTCGTTCTGATTCGGACCAATCGGTGACGTAAGCTA ATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAACGGAGAAGATAACAGAGAACTATACGCACTCTTG AACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATCACCCTGACAAATACCAAGATTTTCACATGAAAG ATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAGGCAAATATATGATATCTATGGTATGGAAGGCTT GAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGGTTGAGGAAAATGAAGGAACGCCAAAAAATGCTG ACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATGGCCTCTTCAGGGGAATGGCTATGACAAGCGAAA TTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCAATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTACTTAAGCA TCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGGTTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCACACTCAGCT GCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACATATACAGC TTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGA CACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGGCTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGG AGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCAAAAGTTAA TTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGAATTTTTGTAT TAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAGAAAACTTCTAATCAGGTTCAGGAAGCAAGGGCTGCATCAGAGAAAGCT CAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAAAGAATTG TGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATTCTGGCCA ACTCAAGGTATGTTTCTTTTCTATTTTTCGCCTACTCCCTAATCAATAAAATTATTGCAGTAAATATAGGATAAATTGCAGTAACACAGTAAAAGTTTAA TAAGTTGGAATAAATCCAAATGCTTCCTTCAAAGATGTAGGGTCAAGGACATGGTAAGGTTACCTATATATGCATTTGTTGCACTACGTGATTTCTTAAA TTACTCTGTTATCTTGGATGAGTAATGAACAATATAACCTTCCTGTGCTTTTAGAGGGAGGCAGCATAGACCTAAGTCAAGAGGTCTCTCAAGTGAGCGA GAATTCCTTCAAATTTTAATAATCTTATACGTTTTTTGACATGATACTACCTGTAAGAAACAACTATTAATAACTAGTAATTAGCACCCAGGACGAGACA TATCTTTCACCTGGTTTGATTAATTTATGTATTTAATATTGTTTTTTATCCTTTACACAAATGAGGCAAAGTTCTGTTTAATTTTGTAATTATTACTTGA GTTTATGTGCTTGGCATTTTATGCAAGTTGTGATAGCTCTTATATAACAAAGATTTGCCATAGATCACCCTTATTCTGTCTGATGAAGCCATCTTGCAAC TTTACCAAAATTGAGTCATTGGAATTCACATGGTTTTACCTTTTGAGGCTGCCATGTTTATTCGTAAATAATAGTTGATGAGTCCTATTTATTCTTGATG CAGCTTCATGAGGGTGTTAAAAAATCAGGCATCATGGGTTTTTGTGATCCATGCCCTGGAGAACTTAAACAATTGTATGTAGAGTACGTTTATGCCGGTA ATCAATACAAGGTTTGTGTTGGTGATTTTGAAGAATTGCTGCTACCCCAGGGTACCCACAGGATATAAAGATTATTATATGCATCAGTAACATTGTTACC TCTTGCAGTTTTGCCTGGTTTACATGCGTGAGGTAGGATTTATTCTCTTAGATTGAATTAGAAAATGTACCTTTTACAATTTTGGGACATTGGTACATTA CTTATTTTTGTAATTTATTTTGTTCCCCTCACCACCCCAAAAATGTACGAAATAAGGGCATTGTAGGAGGTAATGATATTATTTTGTCCAGCTACTAAGC TTTTACATTGTGTAACTCTGGTGCCGGATCCCCACTTTTGATTTTGCTTACTCCTTTGTTTATTGTTGATTCGGTTCCAATTCATACAATAAATTCGTTT TTGGGGCAACATTAGCTTTAAGAATTTTGATATTGCGTTTTCACTTTTTAGTTTCCATTTTGCTTTGTACTTCGCATAATTGACAAGACG
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514291

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514291

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 65.98% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 65.77% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;