Ll_transcript_514293

• Id Trinity: TRINITY_DN50869_c0_g1_i12
• Name Transcript: Ll_transcript_514293
• Sequence: AAATGACCCAATTTTTCATATCATCAACTATATAGGTCTTCACTAAATTCCCAAAACAAAATTTATCCTGGGCTTCATTCACGAACTCATAACCCATCCA GTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAATTCTTGGCTACTGCCACCAACAAACAAAAGCAC TCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGACGTTCAGCTATGAGAGTTATGATTTATGAAGTT CTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTCGTTCTGATTCGGACCAATCGGTGACGTAAGCTA ATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAACGGAGAAGATAACAGAGAACTATACGCACTCTTG AACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATCACCCTGACAAATACCAAGATTTTCACATGAAAG ATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAGGCAAATATATGATATCTATGGTATGGAAGGCTT GAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGGTTGAGGAAAATGAAGGAACGCCAAAAAATGCTG ACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATGGCCTCTTCAGGGGAATGGCTATGACAAGCGAAA TTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCAGTGGATGGAAATGAAGGTGGTGGAGCTGCTACTGCTCTGTTTAGGCA TCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTTCACTAATTGGAGTGCAAGCATCTCGTAATCTATCATCGCACTCAGCT GCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAATTGTCAGAAACTGCAAGTGGACATATACAGC TTGCTTTAGGGCCACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGATGAGAGGAGGTCTGCTTCTGGAGAAGTGAAGATTGGTACAGGTTCGTTTGA CACATCAGTCCGTTATACTCATCGCTTTTCTCCTAATTCACTTGGCTGCATAGTGGGAAGATTTGGGAGTTCTTCTCTTGAGCTTGAAGTTGGTGGTGGG AGGAAGATATCGAAATTTAGCACTGTGCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTACCGTGGGGGCCAAAAGTTAA TTATTCCAATTTTGCTGACAAGGCATTTAAATCCTGTGTTTGCTACTGGAGCGCTGTTTGTCCCAGGATCTCTTTACTTTGTGCTAAAGAATTTTTTTAT TAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAAGGATGAGAATTCTTCTACTCAGGTATGGGTTATCAATATATGCTTTTATTCTCAA TGTGTTATTTTTCTTGTTTGCAACGACTACCCTCTTAATGCTGAATGCAGTTTTGTGTGCTGTGTGATGGCTATCACAATACACATACTCTTCAATAATT TGAAATCTGCTTCTTGTCCATGCATGTCACACTATATGCTTGCATGAGAGAGGAACCTAACTTCTTGTCGAGGTATTAACCTATTGATAGTGGTATTCCT GAGGTTGATCTGTGTAATCATTCTGATAGGTACCAGAAATTTACTATATGAAAAATGGTGTCTAGCTTCTTATTGTAGGGATATTCCCTCTTCATTAAGC TGAAAAGGTAGAAAGAAAAGATAGTAACTGCCTGCAGACTTAAAGGATCGTTCCCCCCTAGGCAAATTGCCCCAAGTCACTTCTGAATAAATTCTCCTCC CTTCCCCATAATGATCTCTCTCTTTACATTCTCATTCTAACTGAAATGTTGGCAGGTCAATTACAAATTCCACCTCCAATCTTTTAACATTTCCCATGTG GTCTAGGATACAAGGTCTATCACATTCCTTTAGAATTTCTATGAGAATTATGTGGTTATAATAACTTGATTGTTACGTGGAGTCACGAATGGTTATAATT TTCACCCAGTTACTTCTTTGTGTGTAAGTGTCTTTTACGCTTTAGCAGACGTTTAAAGGTGCTTGGCATATCGTCCTTTTGACTTTGGTATGCAAGTTAC CCAAGCATTTTGAATATGCTTGCTGCTTGTAGATTTCTCTATTATTCTATGCTTTTCATATAACAGGGGAATTCAAGGTACTGGCTGTTTTAAATACCCA AGTGCGCCTCCAAATAATAATCTAGATGAATAACAATTGTATGCACTAAAGCATTTTTTATATTTGAGAATTTGTAATTTTCTATTGTGACACAAACATG GGATCTTGATTCCCATATCTAATACTAGTCCTAAATAGTTCAGTTTTCACCTTATTTCCTATGGTATGGATACTCATATAGTTCAGCTTTCCTAGAAATC ATATCCATTTTAGATGCAGGCATACCTATACTCTTTTTCTGAATTCTATTGAATTGAATATCCTGGTTAACATCTTCCCTGGGGTTGTGCAGATTCAGGA AGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGGAAAAGAAACAAACAATTAGAAACAGGTGGACTAGTTATTATGAGA GCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGCTTTGAATCAACTTCAGAAGTCATAGATGTTACAACACCTCTGA ATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGCGTAAAAAAATCAGGTATCATGGGCTTTTGTGATCCATGTCCAGGAGAATCTAAACA ATTGTATGTAGAGTACGTTTATGCCGGCAATCAATACAAGGTTTGTGTTAGTGATTATGAAGAATTGCTGATACCCCAGAGCTCCCACGTGATATAGAGA TTAGTATTGTCTTGAGGTACATTTTGTTCTGTTAGATTGAATTAGAAAGTTACCTTCACAATTTTGGGGCCATAAGAAACTATGCGTTTTTCTACCAAAA AAAGAAAGTATGCGTTTAAAATGTGTCGAGATGTATTTAAAGCAATTATTTAAAAGAAGAGTCATAATCAGGTGTCAAGATGTCGAAAGTATTTTTAAAA AAAATACGAAGGTATTAACACCAAACTGGAAAGTATGCGTTATTTTAGTACGTTACATTTTGTATTAATCTAATCATTATTGAGTATAATGAATGGTTGA CATTATCAGTCGATGAATTTGGTTCAAATTCATGTGCTTCAGTATATCTATACTATTAATATCTATACTTCTATATTTATACTTAAGGGAAAACACAAAA TAACCATGGTGTAATTTGTGTTTTCCTATTTTACCCTCAGCATCTTTTTATTTTTACCAAAAAACATATAACATTATTTTATTATTTTATACTCA
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514293

FPKM

• PAB: 0.2
• PNAB: 0.9
• PS1: 0.8
• PS2: 0.6
• PS3: 1
• PW1: 0.4
• PW2: 0.6
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514293

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 67.66% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 67.66% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;