Ll_transcript_514298

• Id Trinity: TRINITY_DN50869_c0_g1_i17
• Name Transcript: Ll_transcript_514298
• Sequence: AAATGACCCAATTTTTCATATCATCAACTATATAGGTCTTCACTAAATTCCCAAAACAAAATTTATCCTGGGCTTCATTCACGAACTCATAACCCATCCA GTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAATTCTTGGCTACTGCCACCAACAAACAAAAGCAC TCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGACGTTCAGCTATGAGAGTTATGATTTATGAAGTT CTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTCGTTCTGATTCGGACCAATCGGTGACGTAAGCTA ATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAACGGAGAAGATAACAGAGAACTATACGCACTCTTG AACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATCACCCTGACAAATACCAAGATTTTCACATGAAAG ATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAGGCAAATATATGATATCTATGGTATGGAAGGCTT GAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGGTTGAGGAAAATGAAGGAACGCCAAAAAATGCTG ACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATGGCCTCTTCAGGGGGTATATTGTTCACTTCATGG CACTTTTTTACTTGTTTTTGTCCTTCTCTCACTGTGCACTCCTTTGTTGATGAACACTAAATAGTGTAGCTTTCAGTCGGCATTTATAACGAGATGGAAT AGAACATCTGTTATGCTTGGTGTATTCTAAAAATTGATCAAAACAGGGCATAGGAGTAAAAAGTAGACCTTGTTTGTACTAAAAAGGTGGAAGTGGAACC AAACGGAATAGAGCAGAATACATCCAGCTTCATTGTATTCTGTCCATGGGCCAAACACTACTGTAGAGTTATTGCCTCAGTTTGAAAGCATAAGAATGGC TATGACAAGCGAAATTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCAGTGGATGGAAATGAAGGTGGTGGAGCTGCTACT GCTCTGTTTAGGCATCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTTCACTAATTGGAGTGCAAGCATCTCGTAATCTAT CATCGCACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAATTGTCAGAAACTGCAAG TGGACATATACAGCTTGCTTTAGGGCCACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGATGAGAGGAGGTCTGCTTCTGGAGAAGTGAAGATTGGT ACAGGTTCGTTTGACACATCAGTCCGTTATACTCATCGCTTTTCTCCTAATTCACTTGGCTGCATAGTGGGAAGATTTGGGAGTTCTTCTCTTGAGCTTG AAGTTGGTGGTGGGAGGAAGATATCGAAATTTAGCACTGTGCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTACCGTGG GGGCCAAAAGTTAATTATTCCAATTTTGCTGACAAGGCATTTAAATCCTGTGTTTGCTACTGGAGCGCTGTTTGTCCCAGGATCTCTTTACTTTGTGCTA AAGAATTTTTTTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAAGGATGAGAATTCTTCTACTCAGGTATGGGTTATCAATATAT GCTTTTATTCTCAATGTGTTATTTTTCTTGTTTGCAACGACTACCCTCTTAATGCTGAATGCAGTTTTGTGTGCTGTGTGATGGCTATCACAATACACAT ACTCTTCAATAATTTGAAATCTGCTTCTTGTCCATGCATGTCACACTATATGCTTGCATGAGAGAGGAACCTAACTTCTTGTCGAGGTATTAACCTATTG ATAGTGGTATTCCTGAGGTTGATCTGTGTAATCATTCTGATAGGTACCAGAAATTTACTATATGAAAAATGGTGTCTAGCTTCTTATTGTAGGGATATTC CCTCTTCATTAAGCTGAAAAGGTAGAAAGAAAAGATAGTAACTGCCTGCAGACTTAAAGGATCGTTCCCCCCTAGGCAAATTGCCCCAAGTCACTTCTGA ATAAATTCTCCTCCCTTCCCCATAATGATCTCTCTCTTTACATTCTCATTCTAACTGAAATGTTGGCAGGTCAATTACAAATTCCACCTCCAATCTTTTA ACATTTCCCATGTGGTCTAGGATACAAGGTCTATCACATTCCTTTAGAATTTCTATGAGAATTATGTGGTTATAATAACTTGATTGTTACGTGGAGTCAC GAATGGTTATAATTTTCACCCAGTTACTTCTTTGTGTGTAAGTGTCTTTTACGCTTTAGCAGACGTTTAAAGGTGCTTGGCATATCGTCCTTTTGACTTT GGTATGCAAGTTACCCAAGCATTTTGAATATGCTTGCTGCTTGTAGATTTCTCTATTATTCTATGCTTTTCATATAACAGGGGAATTCAAGGTACTGGCT GTTTTAAATACCCAAGTGCGCCTCCAAATAATAATCTAGATGAATAACAATTGTATGCACTAAAGCATTTTTTATATTTGAGAATTTGTAATTTTCTATT GTGACACAAACATGGGATCTTGATTCCCATATCTAATACTAGTCCTAAATAGTTCAGTTTTCACCTTATTTCCTATGGTATGGATACTCATATAGTTCAG CTTTCCTAGAAATCATATCCATTTTAGATGCAGGCATACCTATACTCTTTTTCTGAATTCTATTGAATTGAATATCCTGGTTAACATCTTCCCTGGGGTT GTGCAGATTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGGAAAAGAAACAAACAATTAGAAACAGGTGGAC TAGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGCTTTGAATCAACTTCAGAAGTCATAGATGT TACAACACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGCGTAAAAAAATCAGGTATCATGGGCTTTTGTGATCCATGTCCA GGAGAATCTAAACAATTGTATGTAGAGTACGTTTATGCCGGCAATCAATACAAGGTTTGTGTTAGTGATTATGAAGAATTGCTGATACCCCAGAGCTCCC ACGTGATATAGAGATTAGTATTGTCTTGAGGGTTGAGAGATAATGGGTCTGGTAGAACTTGGATTTGAACCAAACACTTTCATAATCCCTATTCTTAGCA AGTGAGTTATTAGCACAACGGACATTGTCAAAATGTCTTGCTGAAAAAGAAAAATAGCTTCCAATAAGGTTGAAAGTTCGATTTCTGTTAACAATACTTA GCAGAAGGACATAAACGAACTCTGAGGAATAACTTACTAATACAAAAAAAATTATATTAAAATCAGTTATTATTTTATAATAATTTTAAACAAACAAATC CATTGCGTGAGAATATGAATGATACTTCCCTTTGGAAGTTAGGAAGTTGAGTTGAATTTCAGTATCCATTTCCAAAGCGATGCGATAGGTTGCGGTACGT CAAACTATGGCGGAAGCAATCGGAAGAGGAGGAGCGTCGTGTATTTTCTGTAACATTACCACCAATTCAACCTCCACTACTCTTCTCCATTCCGATGATA AGGTTGTCGCTTTCCAGGACATTAATCCTTCTGCTTTCAGGCATTACTTAGTAATTCCCGTTGAGCACATTCCCACTGTTAAAGAACTCCACGCAAAACC TGAACACTATTCTTTGGTGAATCACATGTTAGAGGTGGGGAGAACGTTATTACATAGAGATGCACCTCAAGCCAAGCAATACAGGTATTGGGTTCTTTAC ATTCATTATTGTTTTCTTCTTTTCATGTTTGTAATATTAGATTAATCCGAAATGCCCATTTCAACTGCAATTGCTGTTACAAACTATAACTTGTATTATT GGTGTCATAAACTGCTTGTGTGATACTGTTTTAACACAATGCTGTGTTGAATAGCTTTTAATGAAACATAAGTGTTTTCTATTTGTCAAAATTACATGAT CACCTGCGTGCATGCGCTATATTATGCTGCAATACTATATTGGCTATAACTGTCTTCGTGCATAAATTATTAGATATATTTTTAATCTGTTTTTATTGTG GTGCATCTGGGTAATGCCTTCATATTTGTTGAATATACTGTCTAATGTTACATGTTCTACTTAATATTCTTGGTAACTTTGTAGAAAATGAGTAAAAAAG GTTATATAGAGAGAGTTTCGAGATTCAATGCCTTTCCTTTTTTTTACCTTTTGTCTGGATGGATCCATCCAATTATGATTTTAAAAATAATAATGATAAG ATTTTTATTATTGAATGTGCTAGTAAAACCTGGATTACTAACTAGCAATGAACACACTGTGAACTTCAGCAAGAATAGAATTCTATGACCATATAAACAA CAACAAGAATAAGGTTCAGATGCAATCTCGCATTACCTTAAAGCAGAAGGTTTAATTTGACCTGAAGTCAATTGTACATGACCATGTGATTCTTTCTGTT ACCTTCTTTCTGTCAGATTTGGTTTTCATCAGCCTCCACTTAACTCTGTTAACCACCTACACCTCCATTGTTTGGCGCTACCCTATACACCCAGCAGATG GAGATGTATAAAATATATGTCATTTGGACCACTTGGTTTCATTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTCTCCTCAGTTCACTCAAAAGTA TAAATTATCTTGAGTTAGTGCATAGTTAATTTTGGCTTTTCATCTTTCCAGAAAGATGCTACACATATTGGTTCTCATTCAAAATATCCTCTGCTCAATT TCCTGGTGGATGTTTGTAGTTACAGTTATCCCTTTGTATCCTTAGATCATGGTGCATGATATTATTTCCAAAGCTTGGTACTAGTAGTGGCTACCATAAT ATTGTATCACTGACAATTTTCTTATGCCATTGAATTGAACTGGGAAGATTTGAGACAATGATTTCATAGACTATTTTCACATATAATATATTTCACTCAA CCCTTCATATTAAAA
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514298

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514298

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 64.26% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 64.26% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: Link to cantataDB annotations (CNT0000177)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;