Ll_transcript_514282

• Id Trinity: TRINITY_DN50869_c0_g1_i2
• Name Transcript: Ll_transcript_514282
• Sequence: CTCAATTGATTCGTTTAATTTTATTGTTGTAGTCATTTCTTTTCTTGCACGTTGACGTTCGGCTAGGAAAGATAGTTATGATTTACGAAAGGTGTTAGGT TTGTGTGTGTAGTCTGACTCGTAAGGACCAAAAGCACATTTCACAGTTATGAATTTTGATCTGTTTTGGACCAATTGGTGACGTAAGCCGAAAAACCCCT TAAACCTTTTCAAACACTTTTTTTTTCCAGCAAAACCCTAATCCCTTTCCACCGCAATGGAGGAACAGAGCGAGGGAGAAGATAACAAAGAATTATACGC ACTTTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTGTATCACCCTGACAAATATCAAGCTCCTCTC ATGAAAGATATTGCTACGGAGAATTTTCAACGGATATGTGAAGCGTATGAGATATTATCAGATCCAAATAAGAGACAGATATATGATATCTATGGAATGG AAGGGTTGAAGTCTGGTTTGGAACTTGGTCCAAGGCTTGAAAAAGCTGAAGAAATCAAGGCTGAGTTGGAGAGATTGAAGAAAATGAAGGAACGCCAAAA GATGATGTCGCAGTTTCAATCTTCTGGTACAATTCTAGCAAGTATGTCTATGCCACACTTTCTAGACGGTGATGGCCTTTTCAGAGGGTATTGCTCACTT CATCACACTTTTCTCTTGTCTCTGTCACTCTTTTACTATGCACTGCCTTGATGATGAACAGTGAATAGTGTAGAATTTGCTAGACATATTATAGGGGATG GAATAGAATATTCTGTTATGTTTGGCGTATCTTAGAAATAGAACAAAACAGGACATAAGATTACAGAAGTAGAACTTCCATGTTCTGTCCTGCCAAACAC TATCTGAGATTTGTCGGCTCAATTTGAAAACATAATGTTATTATTATTATTTTTATTAGTGATAAAACAACATGCTTTGTTTTAGGAATGGTTTTAATGA TCTTGAGACTCCATCTTAATATAACAAATTGCGGATAAGGCAAGCTGTTGTTAATATTATTATAAAAAATGCTTGTCTTCGGTACAATTGCAGCCTCCAT CTTAAGATTTTGTCAAAAACTGAAAATCCTTTAATTATTTCATCCAAAGACCTCCGTCACAGCAAAAATGTTGTAATGCGTATTTGATTATTTCATCCAA CTGTTTGTGTCTTTTATTATGTTTCTGAGTTTCAGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCA ATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTACTTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGG TTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCACACTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAAT CTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACATATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGA AAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGG CTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTA GGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCAAAAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTA CTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGAATTTTTGTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAA TGATGAGAAAACTTCTAATCAGGTTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAA TTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTT CAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGCGTAAAAAAATCAGGTATCATGGGCTT TTGTGATCCATGTCCAGGAGAATCTAAACAATTGTATGTAGAGTACGTTTATGCCGGCAATCAATACAAGGTTTGTGTTAGTGATTATGAAGAATTGCTG ATACCCCAGAGCTCCCACGTGATATAGAGATTAGTATTGTCTTGAGGGTTGAGAGATAATGGGTCTGGTAGAACTTGGATTTGAACCAAACACTTTCATA ATCCCTATTCTTAGCAAGTGAGTTATTAGCACAACGGACATTGTCAAAATGTCTTGCTGAAAAAGAAAAATAGCTTCCAATAAGGTTGAAAGTTCGATTT CTGTTAACAATACTTAGCAGAAGGACATAAACGAACTCTGAGGAATAACTTACTAATACAAAAAAAATTATATTAAAATCAGTTATTATTTTATAATAAT TTTAAACAAACAAATCCATTGCGTGAGAATATGAATGATACTTCCCTTTGGAAGTTAGGAAGTTGAGTTGAATTTCAGTATCCATTTCCAAAGCGATGCG ATAGGTTGCGGTACGTCAAACTATGGCGGAAGCAATCGGAAGAGGAGGAGCGTCGTGTATTTTCTGTAACATTACCACCAATTCAACCTCCACTACTCTT CTCCATTCCGATGATAAGGTTGTCGCTTTCCAGGACATTAATCCTTCTGCTTTCAGGCATTACTTAGTAATTCCCGTTGAGCACATTCCCACTGTTAAAG AACTCCACGCAAAACCTGAACACTATTCTTTGGTGAATCACATGTTAGAGGTGGGGAGAACGTTATTACATAGAGATGCACCTCAAGCCAAGCAATACAG ATTTGGTTTTCATCAGCCTCCACTTAACTCTGTTAACCACCTACACCTCCATTGTTTGGCGCTACCCTATACACCCAGATGGAGATGTATAAAATATATG TCATTTGGACCACTTGGTTTCATTGAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTCTCCTCAGTTCACTCAAAAGTATAAATTATCTTGAGTTAGTG CATAGTTAATTTTGGCTTTTCATCTTTCCAGAAAGATGCTACACATATTGGTTCTCATTCAAAATATCCTCTGCTCAATTTCCTGGTGGATGTTTGTAGT TACAGTTATCCCTTTGTATCCTTAGATCATGGTGCATGA
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514282

FPKM

• PAB: 0.6
• PNAB: 0.9
• PS1: 2
• PS2: 0.2
• PS3: 1.8
• PW1: 1.2
• PW2: 1.1
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514282

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 63.94% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 63.68% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: Link to cantataDB annotations (CNT0000177)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: Domain of unknown function (DUF3395) (PF11875.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;