Ll_transcript_514305

• Id Trinity: TRINITY_DN50869_c0_g1_i24
• Name Transcript: Ll_transcript_514305
• Sequence: AAATGACCCAATTTTTCATATCATCAACTATATAGGTCTTCACTAAATTCCCAAAACAAAATTTATCCTGGGCTTCATTCACGAACTCATAACCCATCCA GTTATCCACTATATAGGTCCAATCTTCATTTTTTGGGAACTTTCTGCAGATTCTACCGTTTCTATAATTCTTGGCTACTGCCACCAACAAACAAAAGCAC TCAATTGCTCCTTTTATTTTATTATAATAATAATAATTAGTACTCATTTCTTTTCCTAAAACGTGGACGTTCAGCTATGAGAGTTATGATTTATGAAGTT CTGTGTCACTGTGTGTGTACTCTTCTGACTCCTAAGGACTAAACCGCATTTCGTAGTTATGAATTTCGTTCTGATTCGGACCAATCGGTGACGTAAGCTA ATAAACCCTTTCTACTCATTTGTCTTCAAAACCCTAACCTCTAACCACCACAATGGAGGAGCAGAACGGAGAAGATAACAGAGAACTATACGCACTCTTG AACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATCACCCTGACAAATACCAAGATTTTCACATGAAAG ATATTGCTACGGAGAATTTCCAACGGATATGTGAAACGTATGAGATATTGTCAGATTCAAATAAGAGGCAAATATATGATATCTATGGTATGGAAGGCTT GAATTCTGGTTTGGAACTCGGTCCGAGGCTCGATAAAGCTGAAGAGATCAAGGCTGAGTTGGAGAGGTTGAGGAAAATGAAGGAACGCCAAAAAATGCTG ACTCATTTTCAATCTTCGGCTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTTGATGGTGATGGCCTCTTCAGGGGGTATATTGTTCACTTCATGG CACTTTTTTACTTGTTTTTGTCCTTCTCTCACTGTGCACTCCTTTGTTGATGAACACTAAATAGTGTAGCTTTCAGTCGGCATTTATAACGAGATGGAAT AGAACATCTGTTATGCTTGGTGTATTCTAAAAATTGATCAAAACAGGGCATAGGAGTAAAAAGTAGACCTTGTTTGTACTAAAAAGGTGGAAGTGGAACC AAACGGAATAGAGCAGAATACATCCAGCTTCATTGTATTCTGTCCATGGGCCAAACACTACTGTAGAGTTATTGCCTCAGTTTGAAAGCATAAGAATGGC TATGACAAGCGAAATTCAGTCTCAGTTATCAAAACGTAATGCTATTACAATTGGTGGCAATTTAGCAGTGGATGGAAATGAAGGTGGTGGAGCTGCTACT GCTCTGTTTAGGCATCAAATTTCACAAGTTTCTTCAATAGAGTTTGTGGCTTCATCTGGTTTACGTTCACTAATTGGAGTGCAAGCATCTCGGTCGTAAT CTATCATCGCACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAATTGTCAGAAACTG CAAGTGGACATATACAGCTTGCTTTAGGGCCACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGATGAGAGGAGGTCTGCTTCTGGAGAAGTGAAGAT TGGTACAGGTTCGTTTGACACATCAGTCCGTTATACTCATCGCTTTTCTCCTAATTCACTTGGCTGCATAGTGGGAAGATTTGGGAGTTCTTCTCTTGAG CTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTTAGCACTGTGCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCC GTGGAGGCCAAAAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGT GCTGAAGAATTTTTGTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAGAAAACTTCTAATCAGGTTCAGGAAGCAAGG GCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTAT ATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCT GGTTAATGATTCTGGCCAACTCAAGGTATGTTTCTTTTCTATTTTTCGCCTACTCCCTAATCAATAAAATTATTGCAGTAAATATAGGATAAATTGCAGT AACACAGTAAAAGTTTAATAAGTTGGAATAAATCCAAATGCTTCCTTCAAAGATGTAGGGTCAAGGACATGGTAAGGTTACCTATATATGCATTTGTTGC ACTACGTGATTTCTTAAATTACTCTGTTATCTTGGATGAGTAATGAACAATATAACCTTCCTGTGCTTTTAGAGGGAGGCAGCATAGACCTAAGTCAAGA GGTCTCTCAAGTGAGCGAGAATTCCTTCAAATTTTAATAATCTTATACGTTTTTTGACATGATACTACCTGTAAGAAACAACTATTAATAACTAGTAATT AGCACCCAGGACGAGACATATCTTTCACCT
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514305

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514305

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 62.69% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 62.23% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: Domain of unknown function (DUF3395) (PF11875.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;