Ll_transcript_514283

• Id Trinity: TRINITY_DN50869_c0_g1_i3
• Name Transcript: Ll_transcript_514283
• Sequence: CTCAATTGATTCGTTTAATTTTATTGTTGTAGTCATTTCTTTTCTTGCACGTTGACGTTCGGCTAGGAAAGATAGTTATGATTTACGAAAGGTGTTAGGT TTGTGTGTGTAGTCTGACTCGTAAGGACCAAAAGCACATTTCACAGTTATGAATTTTGATCTGTTTTGGACCAATTGGTGACGTAAGCCGAAAAACCCCT TAAACCTTTTCAAACACTTTTTTTTTCCAGCAAAACCCTAATCCCTTTCCACCGCAATGGAGGAACAGAGCGAGGGAGAAGATAACAAAGAATTATACGC ACTTTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTGTATCACCCTGACAAATATCAAGCTCCTCTC ATGAAAGATATTGCTACGGAGAATTTTCAACGGATATGTGAAGCGTATGAGATATTATCAGATCCAAATAAGAGACAGATATATGATATCTATGGAATGG AAGGGTTGAAGTCTGGTTTGGAACTTGGTCCAAGGCTTGAAAAAGCTGAAGAAATCAAGGCTGAGTTGGAGAGATTGAAGAAAATGAAGGAACGCCAAAA GATGATGTCGCAGTTTCAATCTTCTGGTACAATTCTAGCAAGTATGTCTATGCCACACTTTCTAGACGGTGATGGCCTTTTCAGAGGGTATTGCTCACTT CATCACACTTTTCTCTTGTCTCTGTCACTCTTTTACTATGCACTGCCTTGATGATGAACAGTGAATAGTGTAGAATTTGCTAGACATATTATAGGGGATG GAATAGAATATTCTGTTATGTTTGGCGTATCTTAGAAATAGAACAAAACAGGACATAAGATTACAGAAGTAGAACTTCCATGTTCTGTCCTGCCAAACAC TATCTGAGATTTGTCGGCTCAATTTGAAAACATAATGTTATTATTATTATTTTTATTAGTGATAAAACAACATGCTTTGTTTTAGGAATGGTTTTAATGA TCTTGAGACTCCATCTTAATATAACAAATTGCGGATAAGGCAAGCTGTTGTTAATATTATTATAAAAAATGCTTGTCTTCGGTACAATTGCAGCCTCCAT CTTAAGATTTTGTCAAAAACTGAAAATCCTTTAATTATTTCATCCAAAGACCTCCGTCACAGCAAAAATGTTGTAATGCGTATTTGATTATTTCATCCAA CTGTTTGTGTCTTTTATTATGTTTCTGAGTTTCAGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCA ATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTACTTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGG TTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCACACTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAAT CTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACATATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGA AAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGG CTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTA GGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCAAAAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTA CTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGAATTTTTGTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAA TGATGAGAAAACTTCTAATCAGGTTCAGGAAGCAAGGGCTGCATCAGAGAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAA TTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAAAGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTT CAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATTCTGGCCAACTCAAGGTATATTTCTTTTATATTTTTCGCCTACTTATCCTTAT GAAAAACTATTGCAGTAAATATAGGATAAAATGCAAAACACACAGTAGAAGTTTAATATATTGGAATAGAACTAAATGTTGCTGGGTCCAAGGACATGGT AAGTTAACCTTTTGAGTATTTGTTGCACCTCTAAAATCTTGGACGATCAATCAACAATGTAACCTTCCTGTGCATTTAGAGGGAGGCAGCAGAAACCTAA ATAGAGAGGTCTCTCAAGTGAGCAAGAATTCCTTCAGAATTTAATAAGCATGTACTTTTTTTACAGTGATCGATGTAAGAAGCAACTATCGGTACCTAGT AACGGCCACCCAGGATGTGACATATTTTTCACATGGTTTGATTAACTTATGAATTTAATGTCTGTATTGAGCCTTTACATCAATGAGAAACATGCCTATT TAATTTTATTATTATCACCAAGCTTACGCTCTTGACATTTTATGCAAATTGTGACGGCACATGTATAGCTAAGATTTGCCGTAGATCACCACTATACTGA TGAAGCCATCTTGTGACTTTACGAAAATTGAGTGATTGGAATTCACATGGTTTCATGTTTTATTCGTAATAGTGATTAACAAGTGTCCTATTTATTGTTG ATGTAGCTTCATGAAGGCGTAAAAAAATCAGGTATCATGGGCTTTTGTGATCCATGTCCAGGAGAATCTAAACAATTGTATGTAGAGTACGTTTATGCCG GCAATCAATACAAGGTTTGTGTTAGTGATTATGAAGAATTGCTGATACCCCAGAGCTCCCACGTGATATAGAGATTAGTATTGTCTTGAGGGTTGAGAGA TAATGGGTCTGGTAGAACTTGGATTTGAACCAAACACTTTCATAATCCCTATTCTTAGCAAGTGAGTTATTAGCACAACGGACATTGTCAAAATGTCTTG CTGAAAAAGAAAAATAGCTTCCAATAAGGTTGAAAGTTCGATTTCTGTTAACAATACTTAGCAGAAGGACATAAACGAACTCTGAGGAATAACTTACTAA TACAAAAAAAATTATATTAAAATCAGTTATTATTTTATAATAATTTTAAACAAACAAATCCATTGCGTGAGAATATGAATGATACTTCCCTTTGGAAGTT AGGAAGTTGAGTTGAATTTCAGTATCCATTTCCAAAGCGATGCGATAGGTTGCGGTACGTCAAACTATGGCGGAAGCAATCGGAAGAGGAGGAGCGTCGT GTATTTTCTGTAACATTACCACCAATTCAACCTCCACTACTCTTCTCCATTCCGATGATAAGGTTGTCGCTTTCCAGGACATTAATCCTTCTGCTTTCAG GCATTACTTAGTAATTCCCGTTGAGCACATTCCCACTGTTAAAGAACTCCACGCAAAACCTGAACACTATTCTTTGGTGAATCACATGTTAGAGGTGGGG AGAACGTTATTACATAGAGATGCACCTCAAGCCAAGCAATACAGGTATTGGGTTCTTTACATTCATTATTGTTTTCTTCTTTTCATGTTTGTAATATTAG ATTAATCCGAAATGCCCATTTCAACTGCAATTGCTGTTACAAACTATAACTTGTATTATTGGTGTCATAAACTGCTTGTGTGATACTGTTTTAACACAAT GCTGTGTTGAATAGCTTTTAATGAAACATAAGTGTTTTCTATTTGTCAAAATTACATGATCACCTGCGTGCATGCGCTATATTATGCTGCAATACTATAT TGGCTATAACTGTCTTCGTGCATAAATTATTAGATATATTTTTAATCTGTTTTTATTGTGGTGCATCTGGGTAATGCCTTCATATTTGTTGAATATACTG TCTAATGTTACATGTTCTACTTAATATTCTTGGTAACTTTGTAGAAAATGAGTAAAAAAGGTTATATAGAGAGAGTTTCGAGATTCAATGCCTTTCCTTT TTTTTACCTTTTGTCTGGATGGATCCATCCAATTATGATTTTAAAAATAATAATGATAAGATTTTTATTATTGAATGTGCTAGTAAAACCTGGATTACTA ACTAGCAATGAACACACTGTGAACTTCAGCAAGAATAGAATTCTATGACCATATAAACAACAACAAGAATAAGGTTCAGATGCAATCTCGCATTACCTTA AAGCAGAAGGTTTAATTTGACCTGAAGTCAATTGTACATGACCATGTGATTCTTTCTGTTACCTTCTTTCTGTCAGATTTGGTTTTCATCAGCCTCCACT TAACTCTGTTAACCACCTACACCTCCATTGTTTGGCGCTACCCTATACACCCAGCAGATGGAGATGTATAAAATATATGTCATTTGGACCACTTGGTTTC ATTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTCTCCTCAGTTCACTCAAAAGTATAAATTATCTTGAGTTAGTGCATAGTTAATTTTGGCTTTT CATCTTTCCAGAAAGATGCTACACATATTGGTTCTCATTCAAAATATCCTCTGCTCAATTTCCTGGTGGATGTTTGTAGTTACAGTTATCCCTTTGTATC CTTAGATCATGGTGCATGATATTATTTCCAAAGCTTGGTACTAGTAGTGGCTACCATAATATTGTATCACTGACAATTTTCTTATGCCATTGAATTGAAC TGGGAAGATTTGAGACAATGATTTCATAGACTATTTTCACATATAATATATTTCACTCAACCCTTCATATTAAAA
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514283

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0
• PS2: 0.3
• PS3: 0.2
• PW1: 0.4
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514283

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 62.5% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 62.21% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: Link to cantataDB annotations (CNT0000177)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: Domain of unknown function (DUF3395) (PF11875.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;