| Id Trinity | TRINITY_DN50870_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_515944 |
| Sequence | ATTTCTTATACTTCAACCAAATAAAATCTACTCAATTATCTTCCCGCTTACTTCAATGAAAATATCCAGCGCCACATTTTTTCATCAATTTGTTTTAGAA AAAAAATAGAGTTCACAAACTGGTGCCACGTGTCCACAGCCTAGACCATTCTCAGCCACAAGACCCTAATGCCTTCTGGAATCCTCCACCGTTTTTTTAT TATTATTTTTAACTTTATTCACAAATATTTAATTCTCCTTCTATGCTTTTTTGTTTTATTTTTCTATTTTTTATTATCACTTTTTTATTATTTATAACTT CCTTTTTCTTATGATCTTCCCTTCTCTGCTCACACATTTCTTCCATAATACTCTTTTCCTTTTTATCTTCGAATTCCTCATCTGGGTTTCGCTTATTTTC TCAGAATATCTTAATTTTCATGTAAAGTTTTCATTTTTACTTGAAAATCCAAGGTAATTATTGTGATCATTTTTATTTTCAGTTTATGTCTTTAACATTG AGAATCTGAATGATCTGATTTGTGAAAATGGCAACTGAATTTACTCTCTCCTTTTCTGTTATTTTTATAGTATATGTGGAATAACAATAAGTGTAGATAT TGTGAACAGTGTGCTATATAATATTATTATTTTTATTTGCCTTAAAATTTACTTTTTTTTAATAGCCGACCTCACCTAGTAGGGATTAAAATTTTATTTT ATTGTGGATGTATGAAGTTTACCTTTTTATTTTTGGGTATGTCTTGATTATGTAGACTGCTGTTGGAGTTGGTCCCTGTGAAGCTTAGAGTGTTACAAAG ACTGGCTCTGATTTTGCTCCAATGGAGATGCAGGTATTACAAGGAGCAGTTTCAAACTGGGCCTTTTTTGGAATATCCACTTTGAAGTTTTGTTCTTTTC TTTGCATATCATGAATTGTTAAATCATTAGAAATAGGGAACTAAGGTCAATTCTTATGATCTTTAATGTTAGTGTTCTGTGTTAGAAAATTAGTCTCTTT GATTCCACAGAAAGGATGGGACAACATAGTGAAAAAATGATTGTACACAATTAACTCAAGTTGTAACACAAAACTCTTAATTTATGTTACTAAAAAAACC TTACTACTTAATTTTCCAAGCTATCATTTGTGTCATCTTGTGTAGATAATTGATGCTTCTTTTGACTTCCCTGGAACAGTGTTCAATATTCAAATTTTGG GCTGGAGTTAAACAAAACAAAAAATGGACCAAATCAAAGGCTCGAGGTCAAACAAATCTCTCTCGGGTAGTTGCAGCCATTCAAATGGTGGTACAGAATC TGAGAATGTCGCTCAATCGCGGGATGTAACTTCTGCTGGAAACAATCACACTCCCAAGGTTAGGAAACCATATACCATTTCCAAGCAAAGGGAGAAGTGG ACAGAGGAAGAGCATAAAAAATTCCTTGAAGCATTGAAGTTGTATGGTCGTGGCTGGCGTCAAATTGAAGGTACATTCCACGTCGTGATTTAATTGAAGT AATCTGAAAATTCACATGTCTTAAAATCAGATGAAGTATTCTTATTTCATGCAGAGCATATAGGTACCAAAACTGCTGTTCAGATTCGAAGCCATGCTCA GAAGTTTTTCTCTAAGGTTATTTTTTGTTTTTTTAACATTTCAGTAGATGATTCCCTGTGCTAATATGGATGCTATAAACATCAAATTTTGATTTGTTCG TCAATAGACTGACTTGTAATAGAAATGAAAGGATTTCAATCATTTTCAACTAAGAGGATTAATAAAGTTGAAGATGTATAGGTACAATTCTTTATGCCCA GCATCATACTCTCTTATTGGTTTCAGATTGTGCGGGAGTCTGATGGCAATGCTGAAACTTCAAAACAGCCAATTAACATACCTCCTCCTCGTCCGAAGAG GAAACCCCTTCATCCATATCCCCGTAAATCAGTCAACTCTCCGAAAGAACACTTCATCAAGAGTGAATCAGGAATATCTCCACCTTCAAACCTGCTAATT GCAGAGAAAATCACCCAGTCCCCGACCTCTGTTCTATCCGCCTTTGGTTCGGATGCACTTGGGGAATCATTTCTGGACCAGACCAACAGATGTGTTTCAC CGAATTCTTGCACCACTGATATTCACTCACTCAGCTTGTCACCTGTCGAAATGGAAAATGAGTGTATGATATCCAATTCATCAGAGGAAGAAGCGAAAGG ATCTCTAGCTTCAGTTCCTCTATCCACCAGTTCAAAGCTACTCTCGTCTGTGAAATCTGAGTTTAGTTCCAAGGAAACTGACTGTTTCAAAGAAGTTGCC GAAACGCCTCGCGTCACTTGTATCAAACTTTTTGGAAAAACTGTCTCTATGGTAGGCAATCAGAAGTCAATGAATGTAGACGAGGAGGAAAATAATAACT CAATTTCTAATAATTCCAGTGAAGTGGGTAATGTTGAGCATCAAAACCTTGGCCAAGCATGTTCATCTGAGCAAGTAGATATTCATTTATCACTGAGACT GTGTAATAGTAATTGTCACAGAAATCCTGATGGAGTTAAAGTAACAGGAGAGGAGGGAAATTCTTGCACTGGTTCTAATGCAGAATCAGTTGGTGGTATG GAGAATCAATGCAAGATTTTGGATTCTGATGATTCTCAATATAAAAAATCTCATCATGTGGAAGGAAAAGTATCCCAAAGGGGATTTGCACCATATAAGA GATGCTCATCTGAAAGAGATGCCGAGCTCGAGTGTATTCGTAGCATTAAAGGGCGACCCAGTGCATCAGGCTTCCGTCTTGGTTAGAAGAAGAAAAATAG TGAAATAGTTGTGAGAATAAGGAACCTATTTAAGTAGCTGAGATCTAATTGACAAGGACCTGATTTCTAATTCTTTTTCCACTATCCATATGGACTTTCT TTTATTTTTCCACATGAAAAAATTGTCCTATACTTAAAGGAGTGGTTGCATTTTACAGTTAACAAATAGGGACACATAATTTGGTCCACCAGCAAGCAAA TCTGCAGTTGCTTATTCTTTAGCAACTTGTATATCTGGGGTTTCTTCTGTAGCAATTTTTTTTTCAATGTAACACTGGTATAAAGTTGATGCTTAGTGAC TGTCACGATTTCAAATCCTGGAAATACTTTGTCTATTTGTAGGGTAAGGATACAATTATCCTTTTCAGATCCCGCTAAGTGTTGAATATAACACTGCAAA TTTTATGACTTTGATTTATGAATTTTTAATGATTTTATTAATTTTTATTTTATGAAAATGAATTTCTGGGATTTATTGGTAAGGAATTAGGCTAAGCCGT AGTTGAGTTTTAATCTTATTTTATTATTTCATATTTTATGGTAAATTTTGGTAATTCTTGGAGATAGTTGGTTTTGAACCACTATCGGGGCCGAAACTCA CCCGGTACGGCTCAAAAACGTGATTTTGAGTTCCGTAACTCGGAATCGAATTTCGATCGCACCATTGGCTTTGTAATCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180628; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515944
| Blastp | Protein REVEILLE 7 from Arabidopsis with 33.55% of identity |
|---|---|
| Blastx | Protein REVEILLE 1 from Arabidopsis with 54.9% of identity |
| Eggnog | Transcription factor(COG5269) |
| Kegg | Link to kegg annotations (AT1G18330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431386.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |