Ll_transcript_515765

• Id Trinity: TRINITY_DN50871_c0_g1_i1
• Name Transcript: Ll_transcript_515765
• Sequence: CTGAGATATTTGATGATGAATTTCCACCACTCCATTTTTCTTAGAAATCGAAATGGTTCTTCATTTGTTAGTTGTTTACTGACCAAGGAAAAAAGTTGCT TGAAATTGACATAATGGGCATAAGCTCCCGTCTCCACTGATAACGACAAAGGCCGAGAACAGCAATGAATTACATGTCACATCATCTTAATCAATTAATA CGTGATTCTCTTCCATACGAATATCATATATAGACATTACTCATATCATATAGTGTAGCACCTTAGGTTTGAATCAATTTTGATTTCATAAAAATCTCTT AGGATAAAATTATCTTTGTTTCTCGTAACAACTCATTGATGAATGTGAAACTGCGAATCACAGATTACTTTATTTTTTTCTGAAAATCTGGTTCATTCAT TTCGTAAAAGAATCATGAATTGATAAGCTAGAGTCGTTCTCTTTATCTATGCAGAAAAGATAAACATAGATGAAAGCATGAGAAAGAAAATGGAAAGCAA AGCTTGTAGTAAAATAAGCTTCTTTCTCGTTTATAGTTGAAAGTTTGACCAAACCAGCCTCGCTCTTTTAATTAAATTTCACCTAAGCTTGACTCATTTG TTGTTCTTTCACTTCCAAGCCAAAGGAGACAGTTTCAAGGGTCAGTAGCTGTTGGTAAGATTTCCTATTGGCAACCCTTCTTGTCTTGTAGCTATTGAGA ATTCAAGATACATATAATTCTATAAGGAAATATTCCTTTTGGTCATTATGCATGTCTCACCCTGGGGCCATATTTGATAATTTGGATGGAGCACTTTTTG ATGCAGAGAGAACAAGGTCTCTTCATGCCGTTTCTCAAGTAGACTATATATCTACATCGACAAATAGTGAAGCTGGTTATTCCTCTGGAATTGCTGGCTT TCGAGTTGGGGAACTCGTACTTCCTAATGGAGAATCATATTCTGGATCCCATCTTGGCTATGTTCCGGAGGGTCAGGGTAAGTATGTATGGTCAGATGGT TGTGTATATGAGGGGGAGTGGAGACGGGGGATGAGAAATGGAATTGGAAAAATACAATGGCCTTCTGGGGCGATGTATGATGGTGAATTCTCGGGTGACT ATATCCATGGTACGGGAACATATATTGGCTCGGATAGTATTACCTACAAAGGTCGATGGCGATTGAATCTTAAACATGGACTTGGTTATCAAGTTTATCC TAATGGAGATATCTTTGAAGGGTCTTGGATACAAGGAACACCAGAGGGGCCTGGAAAGTATACCTGGGCCAACGGAAATGTATACTCGGGGAATATGAGA GGCGGGACAATGTCCGGAAAAGGAACTCTCACCTGGATAACAGGGGACTCGTTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGTTAGGAGTGTATA CTTGGAGTGATGGAGGCTGCTACGTCGGGACTTGGACACGCGGCCTAAAAGACGGAAAGGGAACCTTTTATCCAAGAGGCAATCGTCTTCCGACGGTGCA AGAGATTTACCTCAGTGCCTTGCGGAAAAGGGGGTTATTGCCAGACTTAAGAAAGCAGAAGCAGGTGGGAGATGTCATGGTTGGTCAGAACCAGAGACTT CAGTCTAATAGAAGAAATGTTTCTCTCGAAAGGCGTTGGAGTCTCGAGGTATCTATCGAGAAAGTGATTGGGCATGATTCAGCTTCCGATTTAACAGAAT CTGTACCAGAAAGCGGGGATAAAGAGGTTAATGCCAAGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTAATAAGTGAGGTCGTGTTAGATAA TATGTTTTCATCAACGTCTAGAACGGCAAGGCGACTTCAAAGAAAACTCAAGGAGATAAAAAGACCTGGTGAAACAATCATTAAAGGTCACCGGAGTTAT GATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACCGTGGGCAAGATTACACCTGTACAGAGACGAGAAGTTAGAGCATCGGATTTTGGTGCTAAAG CAAGCTTTTGGATGGATTTTCCGAAAGAAGGATCTCAATTGACACCTACTCATCAATCGGATGATTTTAAATGGAAAGACTACTGCCCGATGGTGTTCAG AAATTTAAGAGATATGTTCAAGATTGATGCCGCCGACTACATGATGTCAATTTGTGGAAATGCTGCTTTGAGGGAACTATCTTCCCCCGGAAAAAGTGGC AGTGTCTTTTTTCTCTCTCAGGACGACCGTTTCATGATCAAGACACTACGAAGATCTGAAGTGAAGGTTCTTCTAAGAATGCTTCCGGACTATCATCACC ATGTGAAGTCTTACGAAAATACGCTCATCACAAAGTTTTTCGGCCTGCACAGGATTATACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAA TATGTTTTGCACAGAATTAAGGATCCACCGGAGATTTGATTTAAAAGGTTCGTCCCTTGGACGGTCATCGGACAAGATAGAAATCGATGAGAACACCACT CTTAAAGATTTGGATCTGAACTACAACTTCTACTTGGAACCATCTTGGAGGGAGTCTTTATTGAAGCAGATTGAAATAGACAGCAAGTTTTTGGAAGCAC AACACATTATGGACTACAGCCTTCTTTTAGGTGTTCATTATCGAGCTCCTCAGCATCTACGTCGTATGTCGTACAACCCAAGTACTAGTGGCGATGGATT ACCAATTCTCGCAGAGGAAGACCCTCTGGAGGATGAAGTACTGAACTATCCACAAGGCCTTGTTCTGGTTCCTCGAGGAGATGATAATAGCGTTGTTGTC GGGCCTCATGTGAGGGGTAATCGGTTGCGAGCTTCATCTGCCGGCGATGAGGAGGTCGATCTACTTCTACCTGGTACAGCAAGACTCCAAATTCAGCTCG GCGTAAACATGCCATCGAGGGCAGAGCTGATTCCCGGAAAACAGGAAAAGCAAATGTTTCACGAAGTCTACGATGTCGTACTGTACCTGGGAATCATCGA CATATTGCAAGACTACAACATGACTAAGAGGATTGAACATGCGTATAAATCTCTTCAGTTTGATTCGTTGTCTATTTCCGCCGTGGACCCTACATTCTAC TCGCATCGCTTCCTGGAATTCATTCAGAAAGTGTTTCCACCAAATGCAACGCCGGGTTAAAACTTTCGAGGTTAATTTTACCCGGTTAGTTTATTCGGAA AGTGTGAACATGGGTACCCTTTTATGCAGGCTCCATCTGGGTAATCTCAAATCAATGCTTTGAATTATTTATCATTCCTTAGATAACATGGGTTTATTTG TTTCTTCTGGAGCTAACATGGGTTTATTCCATTGTGCTTTCTTTGACTCTAGTGACTTAGATTTGAAATACAATTGCATATGTAGATTCTATCAATTTCA TCATCCATGTAAGATGATATAAAACATTTACATAATGTATACACAAAAACAGAAAGCATAAAGAAAATAACAACAATATCCAAACTTTTTCTG
• Tissue: pods
• Gene name: LI_gene_180638;
• Additional information: details;

Expression of Ll_transcript_515765

FPKM

• PAB: 4.5
• PNAB: 8.2
• PS1: 9.3
• PS2: 3.3
• PS3: 6.1
• PW1: 11.2
• PW2: 13.4
• PW3: 10.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_515765

• Blastp: Phosphatidylinositol 4-phosphate 5-kinase 9 from Arabidopsis with 73.83% of identity
• Blastx: Phosphatidylinositol 4-phosphate 5-kinase 9 from Arabidopsis with 73.83% of identity
• Eggnog: whole genome shotgun sequence(COG4642)
• Kegg: Link to kegg annotations (AT3G09920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455414.1)
• Pfam: MORN repeat (PF02493.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;