Id Trinity | TRINITY_DN50871_c0_g1_i20 |
---|---|
Name Transcript | Ll_transcript_515787 |
Sequence | CTGAGATATTTGATGATGAATTTCCACCACTCCATTTTTCTTAGAAATCGAAATGGTTCTTCATTTGTTAGTTGTTTACTGACCAAGGAAAAAAGTTGCT TGAAATTGACATAATGGGCATAAGCTCCCGTCTCCACTGATAACGACAAAGGCCGAGAACAGCAATGAATTACATGTCACATCATCTTAATCAATTAATA CGTGATTCTCTTCCATACGAATATCATATATAGACATTACTCATATCATATAGTGTAGCACCTTAGGTTTGAATCAATTTTGATTTCATAAAAATCTCTT AGGATAAAATTATCTTTGTTTCTCGTAACAACTCATTGATGAATGTGAAACTGCGAATCACAGATTACTTTATTTTTTTCTGAAAATCTGGTTCATTCAT TTCGTAAAAGAATCATGAATTGATAAGCTAGAGTCGTTCTCTTTATCTATGCAGAAAAGATAAACATAGATGAAAGCATGAGAAAGAAAATGGAAAGCAA AGCTTGTAGTAAAATAAGCTTCTTTCTCGTTTATAGTTGAAAGTTTGACCAAACCAGCCTCGCTCTTTTAATTAAATTTCACCTAAGCTTGACTCATTTG TTGTTCTTTCACTTCCAAGATTTTATTTTCTCTACGGAACCGAAGCTGTCAAACTAATCATAAATTCTTCACTAGCCACAATTTCTCAATTGTTTTTTTA AAGCCAAAGGAGACAGTTTCAAGGGTCAGTAGCTGTTGGTAAGATTTCCTATTGGCAACCCTTCTTGTCTTGTAGCTATTGAGAATTCAAGATACATATA ATTCTATAAGGAAATATTCCTTTTGGTCATTATGCATGTCTCACCCTGGGGCCATATTTGATAATTTGGATGGAGCACTTTTTGATGCAGAGAGAACAAG GTCTCTTCATGCCGTTTCTCAAGTAGACTATATATCTACATCGACAAATAGTGAAGCTGGTTATTCCTCTGGAATTGCTGGCTTTCGAGTTGGGGAACTC GTACTTCCTAATGGAGAATCATATTCTGGATCCCATCTTGGCTATGTTCCGGAGGGTCAGGGTAAGTATGTATGGTCAGATGGTTGTGTATATGAGGGGG AGTGGAGACGGGGGATGAGAAATGGAATTGGAAAAATACAATGGCCTTCTGGGGCGATGTATGATGGTGAATTCTCGGGTGACTATATCCATGGTACGGG AACATATATTGGCTCGGATAGTATTACCTACAAAGGTCGATGGCGATTGAATCTTAAACATGGACTTGGTTATCAAGTTTATCCTAATGGTGATATCTTT GAAGGCTCTTGGATCCAAGGAACACCAGAGGGGCCAGGAAAGTATACCTGGTCGAATGGAAACGTATATTTAGGGAATATGAAAGGTGGGAAAATGTCCG GAAAAGGAACTCTCACCTGGATAAATGGAGACTCGTTTGAAGGAAGCTGGTTAAATGGAATGATGCATGGGGTCGGGGTATATAATTGGAGTGATGGAGG CATCTATGTTGGGACTTGGACACAGGGTCTGAAAGATGGAAAAGGAACATTTTATCCAAAAGGTAGTTGTCTTCCATCTGCACAAGAAACTTATCTCAAT GCCTTGAGAAAAAGAGGGTTATTGCCAGATATGAGAAAGCAGAATCAGTTTCATATTAATCATGTTGTTTCTGTTGATATGGGAGAGGCCAATGTTGGTG AGAACCAGAGATCATTTCATCATGTTTCATCTGGCAAGCTTGCCCAAGGAAACCTTTTAAATCTGGAACAATCTCGTAGCAAAAACATCTCCCTCGAAAG ACGCTGGAGTCTGGAGGTATCTATCGAGAAAGTGATTGGGAATGACTCAACAGATTCTATACTAGAAAGTGGAGATAAAGAGGTTAATGCAAAGATTCCG ATTGTGGAACGAGAGTATATGCAAGGTGTATTAATAAGTGAGCTAGTTTTAAATAATAGTTTTTCATCATTGTCTAGAAGGGCAAAACGGCTTAGAAAAA AACTTGCCAAAGAGATTAAAAGACCTGGTGAAGCAATCATTAAGGGTCATAGGAGTTATGATCTTATGCTCAGTTTGCAGCTCGGAATAAGGTATACTGT GGGAAAGATTACCCCCATACAGAGGCGAGAAGTTCGAGCATCAGATTTTGGTCCCAGAGCAAGCTTTTGGATGAATTTTCCCAAAGATGGTTCTCAATTG ACACCTCCTCATCAATCAGAGGATTTTAAATGGAAGGATTATTGCCCAATGGTGTTCAGGAATTTGAGAGAGTTGTTCAAGATTGATGCTGCTGATTATA TGATGTCCATTTGTGGAAATGATGCTCTAAGGGAACTGTCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAA GACACTGAGAAGATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATAATCACGTGAAGTCATATGAAAATACACTCATCACAAAATTTTTT GGTCTGCACAGGATTATACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATCGAAGATTTGATT TAAAAGGTTCATCCCTTGGACGTTCTTCGGACAAGATAGAAATCGATGAGAATACTACTCTTAAAGATTTGGATCTGAATTACTGCTTTTACTTGGAACC ATCTTGGCGGGAGTCTTTATTAAAGCAGATTGAGATTGATAACAAGTTTTTGGAAGCACAGCACATAATGGATTACAGTCTCCTTCTAGGGGTTCATTAT CGAGCTCCCCAGCACCTGCATCCTGTCATGTCATACAACCGAAGTATAAGTGGAGATGGATTGGCAATGCTTGCAGAGGAAGGTGCATATCAGATCCGAT CTAGAAGGCTGATGATTTGTGATTGGTGTTTATTGATTGATGTTTATTTATAGGAAGTGTTTAATTAAATTTGTTGATGCATTTTTAGTTAAAAGTTTGC ATTCTTAGGAAGTATGAAACTAATGACCTGTAGATAAATGTCGTGTCCCCAATCATTTATATGGCCTGCAGATGATAGAAATGCTACTTATTTTGGTATT ATGAGGTAATGAAGAGTGAAGACGATGAAATTGATTAGGGGTATTTCTTAAAACTACTTTTTTACATCCCGAAATGGCTAATGTTTGGTAACATAAGATA GGCAAGACTTAAGTTTGGATTTTCTACTTAAACTTTGTTAGCACTGGTTTTGTAAAATGTAGACCGGACTAGCTGGCCAGAAGTGAAACCCAGGTCCTTT GCTGGTCTGGTTACAGATGCTGTCTATTTTTCAGTCAAACCCTTTCAACCCAACTGGTTTGTCTTTCTCTCTTTTTTTTGTCCAACTCTTTCAGTTTTTT GTTTTATCTTGCTGATTTTTTTTCCAACAGAACTGCCAGATTGGCAGTTGAACTTGTCAATCAGCTGCCTGGTAAGGTTGGCATCTGGTCCATGGTTTAG AGCTATGATTAGGCGCCACGCCGTTTTAGCAAGTGTATAGGCTTATCCTCTTAATCCCTTATCTATAATTTTGTGTATAATTATGCTTTGAACTTTCAGC TATGACTTCTATCCTTGATTTTTCTACTAGTACCATACGAAACTGATTAATTTGAAAACTTTGCTAATGATCAACTGACAGATCCTCTCGAAGATGACAT ATCCAACTATCCACAAGGCCTTGTTCTGGT BLAST |
Tissue | pods |
Gene name | LI_gene_180638; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_515787
Blastp | Phosphatidylinositol 4-phosphate 5-kinase 9 from Arabidopsis with 73.71% of identity |
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Blastx | Phosphatidylinositol 4-phosphate 5-kinase 9 from Arabidopsis with 73.71% of identity |
Eggnog | whole genome shotgun sequence(COG4642) |
Kegg | Link to kegg annotations (AT3G09920) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461020.1) |
Pfam | MORN repeat (PF02493.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |