Ll_transcript_516369

• Id Trinity: TRINITY_DN50872_c0_g1_i15
• Name Transcript: Ll_transcript_516369
• Sequence: GAATAGGTGAGAGTATAAAAAGTTTTAATGAATAAGGATTCTGAGTACTGTAAGCATGATAGGAAGAAACAGATTCTGATGTAGAAGAGTAGAAAGTTGT TAGTCCACGAAGCGGCGTTGAATCGATGATTAATAATTAGGTCATAGATCCACTTCTTTCCCTTTCCATCCACTTCCTTCATCTCCGTCGAGCATTGTGA AGAAAAGGAGTGAGAAGTTTGATTCTGTTTTTTTTCTGGATTTCACTGTATACAACAAAAGTTTCACCCACTATGGAAGCCGAAAAATCTAATGTTTCAA AGGCGGAAGAACTAAAGCTACTAGCCAATGAAGCATTCAGTGCCCGAAAGTATTCTCAAGCTATTGATTTATATACACAAGCAATTGAGCTAAGAAGTCA AAATGCAGTTTACTGGGCTAACCGTGCGTTTGCCCATATCCGGCTAGAAGAATATGGTAGTGCAATAGAAGATGCTACAGAGGCTATTGAAGTTGATCCT AAGTATTCAAAGGGTTATTATAGGCGAGGTGCTGCTCATCTAGGGCTGGGAAAATTCAAGGAAGCACTGAAAGATTTTCAACAGGTTAAGAAAATGTGTC CAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCAGTTATGAAACTTAAGTTTGAAGAAGCAATTGCTGCTCCGGAGGCTGAAAGGCA TTCAATAGCTGAATCCATAGATTACAAGTCTATAGGAAAGAGCCGCAATTCTTCGGTGCCCACCAAAATGGCCATAGCGGCAGTGACAGTAGCAGTTATG GCAGTGGTGGTGATGTTGTTCAGGTCATCAATGACCATAATTGTTGCTGCAATTGTGGTTGGTTTGCTGTTGCTCCTTGGGGCATTTAGGTGGAGTGGCC ACAATACTGATGTCGAGTCACAATACTCAGGAGCAAGAATAGAAGGGGATATCATTACTTTAGATTTTGTGAAGAAAATGATGGACGATTTCAAAAATCA GAAGTGCTTACATACACGGTATGCATACCAGATTGTGTTGCAAACTAGAGAGAGATTGCAAGCTCTGCCTTCTCTTGTTGATATAAATGTTCCTGATGGC AAACATTTTACCGTTTGTGGCGATGTGCATGGTCAGTTCTATGATCTTTTGAATATTTTTGAGCTTAATGGGCTTCCTTCAGAAGAGAATCCATACCTAT TTAATGGTGACTTTGTGGATAGGGGATCTTTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAG AGGTAATCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGTGAAGTGCGCTCGAAGTTGAATGACTCATTTGTGGAACTATTTGCGGAAGTA TTCTGCTCTTTACCTTTGGCTCATGTGATAAATCAGAAAGTTTTTGTAGTTCATGGAGGCCTTTTTAGTGTTGATGGGGTCAAACTCTCTGATATCCGTG CAATTAATCGGTTTTGTGAGCCTCCAGAAGAAGGGTTGATGTGTGAATTGCTATGGAGTGATCCACAACCTCTCCCGGGAAGAGGCCCAAGCAAGCGTGG CGTAGGTCTTTCTTTTGGAGCAGATGTAACAAAAAGGTTTTTGCAGGAAAATAATTTAGACTTAGTTGTGCGATCTCATGAAGTAAAAGATGAGGGTTAC GAGGTTGATCATGATGGTAAACTCATAACTGTTTTCTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCATTTATTCGATTTGAAGCACCGG ATTTGAAGCCTAACATTATAACATTCTCTGCAGTGCCACACCCTGATGTCAAGCCAATGGCTTATGCAAACAACTTCCTTCGGATGTTTTCATAGCGAAT AGAATTGTGCTGCTTAGAATCTCTGTTGTGCCCTAAGGGCATGGATTCAGAATGTGGCTAGAGAAGATGTGGTAAATGTTATTCATTGTTGTTATGTATA ATATTCGTGACAACATTTTATTAGTATCCATTTTTTTGTCCCTCCAAATGTAACAAGCTGTTGATTAGATTTGACTCAGTTTGAGATTGAATTGGGATAT TTGTTTATAAAACAGTCTATTTTTGCTTTAGTGAACTAATTATGTGTTACACTCCC
• Tissue: pods
• Gene name: LI_gene_180642;
• Additional information: details;

Expression of Ll_transcript_516369

FPKM

• PAB: 6.7
• PNAB: 8.4
• PS1: 5
• PS2: 1.7
• PS3: 4.2
• PW1: 4.1
• PW2: 4.4
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516369

• Blastp: Serine/threonine-protein phosphatase 5 from Lycopersicon with 79.96% of identity
• Blastx: Serine/threonine-protein phosphatase 5 from Lycopersicon with 79.86% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (543849)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426308.1)
• Pfam: Tetratricopeptide repeat (PF13432.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;