Ll_transcript_516355

• Id Trinity: TRINITY_DN50872_c0_g1_i3
• Name Transcript: Ll_transcript_516355
• Sequence: CATGATTTATGATAGAACATTATGGCGTTGTTTGGTCCATGTAGCCGACCTCACCTAGTGGGACTAAGTCTTGATTGTTGTTGTCACCATCAGTACCACT TTATAATGAGCAGGATGGGGTTGTAATTGTAAGACGTCCTAATGGTGCTTTTTGTTATGCTTGTAGGGATGATATGATTTTCTTGGCCTTCACTCCCTTT GTTTAATTTAGAATTCTGACATTAATCTAACTTCGTTATACTATAGCTTGATTTCATTAATGGGCTAGAAGAAAATGGTGTTTTTTATGCTAGATGTGGA GCCACAATATTCAGGAGCAAGAATAGAGGGGGATGTTGTTACTTTGGATTTTGTGAAGAATATGATGGGTGATTTCAAGAATCAGAAGTTCTTACATAAG CGTTATGCATTCCAGATTGTTTTGCAAACACGAGAGATATTGCGAGCCTTGCCTTCTCTTGTGGATATAAATGTTCCTACTGGCAAACTTTTTACTGTCT GTGGTGATGTGCATGGTCAGTACTATGATCTCTTGAATATTTTCGAGCTTAATGGGCTTCCTTCAGAAGATAATCCTTATCTATTTAATGGGGACTTTGT GGATAGAGGATCCTTTTCTTTGGAAGTCATCCTCAC
• Tissue: pods
• Gene name: LI_gene_180642;
• Additional information: details;

Expression of Ll_transcript_516355

FPKM

• PAB: 2.2
• PNAB: 0.8
• PS1: 0.2
• PS2: 0.8
• PS3: 0.9
• PW1: 0.6
• PW2: 0.9
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516355

• Blastp: Serine/threonine-protein phosphatase 5 from Lycopersicon with 89.57% of identity
• Blastx: Serine/threonine-protein phosphatase 5 from Lycopersicon with 89.57% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (543849)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461786.1)
• Pfam: PPP5 TPR repeat region (PF08321.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;