Ll_transcript_516294

• Id Trinity: TRINITY_DN50874_c0_g1_i13
• Name Transcript: Ll_transcript_516294
• Sequence: TTATAATTTGTCACCTCTTTGTCTTCTCCACTGTTCTGTTATTTACTTTTTATTATCATTCAACTGTTTTTCAAATCCCTCACCTTCTTTCAACTCCTTA TTAATGCACCTTCCATAATTATCATTTCTCATACAACTTTATCTCAAAACCTTCTAACTCTTTCTCTCTAAACTCGCCGGAAACCTCTTCGCCGTCGCCG GCCATGGCGGACCAGTTTTCCAGCTCCGTCGCATTTGGACTCAATCTATCCAAGCGAATTTACTACGAAAAAGGATCGGTGCCAACTCCGGCACCGGCAA TGTCCAGGTCACTGGAGGATTACCTACCTGCAGCTCCGATGTGTTACGCGGTGATAACGGATGCGGAGACGGTTGAGAACCCGGACATTCGGAGCTACCA GCCGTACGTGCTTGGACGGTGTGAGCCACCGGCGCTGATACCGCTGCAGCTTCATGGAGTAGCCATGGAAGTTGAGTGTTGTTTGGATACGGCGTTTGTA ACGGTGGAGGGAACGTGGCGCGTGCATTGCGTGACGGCGAGTAGCAAGTGTGATTGTCAGGTTGCTATACCCATGGGAGAACAGGGTTCACTTCTAGGTC TCGAGGTTGTCGATGCTGAAAAATCTTATCATACTGAATTGATCTCTTTAAAAGATGAGAAGGATAAGGATAAAGTGGCCAAATCTAAAGATGGATACTT TTTGAAGAGCCAAATATACACCATTAAGATTCCACAGTTAAGAGGAGGCTCTATCTTCTCAATTAAGATCAGATGGAGTCAGAAAATACTATTTCATAAT GGCCAGTTCTCCCTTAGTGTTCCTTTCAGCTTTCCTTCATATGTCACACCTGTTGGAAAAAGAATTTCTAAGAAAGAAAAGATAATTTTGGAAGTGAATT CTGGTGCTGCAACAGAAGTGTTATGCAATACCATCAGTCATCCTCTTAAGGGACTAGTGCGCCAAGCTGGAAAATTAAGTTTATCATATGAAGCAGAAGT GCCAGCATGGTCAAGTACAGACTTTGATTTCTCATACACTGTTTCTTCAACTGATATATTTGGTGGTGTGCTCTTGCAATCTCCATACCTGCGTGATTTT GATGATAGGGAGATGTTTTGCTTGTATATCTACCCGGGAAATGACCAGGATAGAAAGGTTTTTAGAAAGGATGTGGTGTTTGTAGTAGATATAAGTGCAA GCATGAAGGGAAGCCCTCTTGAAAACATAAAGAATGCACTACTGTCATCAATCTCTCAACTAAATTCACAAGATACGTTTAACATTATAGCTTTCAATGG GGAGGTCAACTTATGGTCCTCATCGATGGAGTTAGCTACCGAGGAAGCAATTCTAAAAGCTACCAAGTGGGTTGACACTAATTTTATTGCAAATGGTGGT ACAAACATCTTCCTTCCCCTAACTAAGGCAATGAAGCTATTCCAGAAATCAATGGATTCAATCCCTCTTATTTTTCTCATTACTGATGGTGCTGTTGATG ATGAAAGGGAGATATGCAATTTTGTGAAAAGTTGTGTCACAAGTGGGCAATCAATTCGTGCACCTCGCATATGTACTTTTGGCATAGGTGTGGATTCTAA CAACCTCTTCTCTTGTAATCTTAAGAAAATCGTTTCTGTGACATCATTAATTTAGCAATGTGATTCTGACATTTCAATCTTTTATAAGTGTTTTGCTTAA TTTAGCTGGTGTCTTAAGTAGCCAAAATGTATTGAAACTTAATTTAGATTTTAGGCATGTTTACAAACTTAAATTATGCATGCCAATAATTAGTTGAACA AATGCTTTGGCATTCTGGTTAGTTGTCAAGCTGAGGCTACTCAAAATCAGGTTTCATTGTGTTTAAGAATGAACGAAAGTAAGAACTTATGTACCCCAAA AAAAATGCCAACAAGGGTTGGCTCAAATTATAGGATCTATCAATATTGACGATAAGGTATTGAGTTCAGCACATTTCCTTGCCCATCACTTGTTTGTGAC ATACAGTACCACTGTCGCATGCTGTAGGCCATTTATAATTCATTTGTATTTAGTGTCTTTGTAGGTCTTTGGCAATTCCTTGACCTTGGAGTGAGGCAAC CTCCTCTCCCATAAACCTTTGAACGAAAAAAAAGAAGAATGTGTATTCCTCAATTACCTTTTATCATAATATTAGTCAATGAGACACTCGATTTATTCTT GTTGCTAATGCCAAATGCCATTTAGCACTTCTATAAATCTCCCAAAAACAGCACCCTACTCTCAAAACCCCAACTATCGCCAATACTATTTAACATAAAT CTGTTTATTTGTTGCAACATTGTTCATCGAACTGGTTTTAGGAGTATCTCTGTTTTGTAACTTGAATTTTTCAGGTTTACATTGTAATCACTACTTCCTG CAAATGCTAGCACAAATTGGGAGGGGTCATTATGATGCCGCTCATAATTTAGATTCAATCGACTTTCGAATGCAAAGGCTATTCATTACTGCTTCATCAG TCATAGCTTCTGATATAACAATGGAAACTATAGAAGATCTTGATTCACAGTTATTCCCAAGTCATATTCCGGACCTATCATTGGGAAGTCTGTTGATCAT ATCGGGAAGATACAGTGGAAATTTTCCTGAGTCAGTTAAAGTTGCTGGCACTTTGGCAGATATGTCCAAATTTGTAGTGGACCTTAAAGTGAAAAGAGAA AAGGATACACAACTAACTAATGTCCTTTCAAAGAGACATATAGACTTTGTTACTGCCGATGCATGGTTATTAGGAAGTGAAGAGCTGGAAGAGAAGGTTA TTGAATTGAGCACTCAAAACAATGTTACATCAGAGTATACCTGCATGGTTCTTGTGGAGAAAGATGAAGGAAAGAAGGCATCTCAACCTGAACCATTTCT GATACAAAAGGTATATAGCAGATTTAGCCTCCAAAGCTTAGATCTTAAAGGTCAGAAGTTATTCCTTGGAGGCATGGGTCTTGGATTTGGTGACATGAAA GCAACTGCTGCGAACATTCCACCAGCAATAAAAGAAGCAAAACCATCTGAAGGACTATTGCAGAAGGCTGCTTCCACTTGCTGTGGTCGATTGGCTAATA ACTGTTGCGGCATGTGTCTGTTGCAGACTTGTGCTTTTGTGAATGACCAATGCACCATTGTTTGCACCCAAATTTGTGCTGCTCTTGCTTGTTTTGAGTT AATCAAATGCTGTATTGAGCTATGTGACTGTGATTGCTTTGAGTGAAATTATATTTATATGCTAAGTTAATCATAAGAAGACCTTTACCTTATCAAAAAT TGTTAATACATAAGCACTTGTACCATGATGTCTACTGCAGCTTATACTTGCTGATACAAAATGTCCTCCACCGTGATCGTATAGTGTTGACAATATGCTA TTTTTTGTTATAATGTTCATAATATGCTAAGTTTATGTTCTTCTTGGG
• Tissue: pods
• Gene name: LI_gene_180648;
• Additional information: details;

Expression of Ll_transcript_516294

FPKM

• PAB: 15.7
• PNAB: 13.9
• PS1: 2.5
• PS2: 0.5
• PS3: 1.6
• PW1: 25.1
• PW2: 45.1
• PW3: 64.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516294

• Blastp: Inter alpha-trypsin inhibitor, heavy chain 4 from Mus with 31.25% of identity
• Blastx: Inter alpha-trypsin inhibitor, heavy chain 4 from Mus with 31.25% of identity
• Eggnog: von Willebrand factor, type A(COG2304)
• Kegg: Link to kegg annotations (16427)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456456.1)
• Pfam: VWA domain containing CoxE-like protein (PF05762.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;