Id Trinity | TRINITY_DN50874_c0_g1_i18 |
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Name Transcript | Ll_transcript_516304 |
Sequence | AAACCTTACCTTCTTTCACCTTTTATTAATAAAGCCCCTTCCAAAACCATCACTTTCTCATCACAACTTTTTCCAAACTCATTCTCTCTCCGACATGGCG TACCAGTTTTCCACCTCCGTCGCATTCGGACTCAATCTATCAAAGAGAATTTACTACGACATAGGTTCTGCTCCAACTCCGTCGCCGGCAATGTCCAGGT CATCAAAGGAGTACCTACCAACGGCGCCGATGTGTTACGCTATGATAACCAATCCGGAGACGGTTGAGAACCCGGACATTCGTAGTTACCAGCCTTACGT GCATGGCAGCTGTCAGCCGCCGGCGCTGATACCTCTACAGCTTCACGGAGTTGCCATGGAAGTTGAGTGCTGTTTGGATACGGCGTTTCTCACGGTAACC GGAAAGTGGCGCGTGCATTGCGTAACGGCTAGTAGCACGTGTGATTGTCAGGTTGCTATACCCATGGGAGAACAGGGTTCACTTCTAGGTCTCGAGGTTG CTGATGCTGAAAGATCTTATCATACTGAATTGATCTCTCTAAAAGATGAAAACGACAAGGAGAAAGTGACAAAAGCTAAAGATGGATACTTTTTGAAAAG CCAAATATACACAATTAGGATTCCACAGTTTAAGGGAGGTTCTATCTTCTCAGTTAAGATCAAGTGGACTCAGAAAATACTATTTCACAATGGCCAGTTC TCTCTTAGCGTCCCTTTCAGCTTTCCCTCGTATGTCACGCCAGTTGGAACAAAAATTTCTAAGAAAGAAAAGATAATTTTGAAGGTGAATTCTGGTGCTA CTACAGAAGTGTTATGCAAAACTATTAGTCATCCTCTTAAGGGACTTTTGCGCCAAGCTGGCAAATTAAGTTTATCTTATGAAGCAGAAGTGTCAGCCTG GTCAAGTACAGACTTCAGTTTCTCATACACTGTTTCTTCAACTGACATATTTGGTGGTGTGCTGTTGCAATCTCCATTCCTGCGTGATTTTGATGATAGA GAGATGTTTTGCTTGTATCTCTACCCTGAAAATGGCCAGGATAGAAAGGTTTGTTTGCAATGAAGTATTTTGTACTTATGATTGCTTAAGGCATGGTAGC TAGTCGAGATTTTGTGTATATATGTCACTTGAATGCATCAAAGGGTTATCTTATGTTCGCTTAAGGCAGGGAAACTCCTTTTTAGTGCTAAACCCTGTGA AATTGATATTCCGTTCATTAAATCTGGTCTACAAACCAGATTATTCTAATAAAATATGACTATTAAGCTGTCTCCACTTCTATGATGGATGTCTGTTCTT TGCAGAGTCTTATCTAAGGAAGAATGATCTCATGCAGAATAATGATTGTATTTCAAAGTAGAATGAAATTTATATTTATATACGTAATCGAATGATTAAA GTTATAAGAAGCTCATGGAACGTGGAAAAATTGTCTTGGACCAAATTAGTTCAAAGGAGGATAGCAACATTATTATAGTTCACATTACACAAGTGCATCT TAGCTTCAATCAATCTGTGCTTAATTTTCACACATAGTCTGTCTATGGCCGTTTTGCAAATATATAATGGCGCATTCTGTTACGATCATGTGATAGGTTT TTAGAAAGGATGTGGTATTTGTAGTAGATATAAGTGCAAGCATGAAGGGAATTCCTCTTGAAAACATTAAGCATGCAGTACTGGCATCACTCTCTCAACT AAGTGCACAAGATACATTTAACCTTATAGCTTTCAATGTGGAGGTCAACCTATGGTCACCATGCATGGAACCAGCTACAGAGGAAGCAATTCTAAAAGCT ACCAAATGGGTAGATACTACTTTTATTGCAAATGGTGGGACAAACATCATGCTTCCCCTAACTAAGGCAATGAAGCTGTTCCAGAAATCAACTAATTCAA TCTCTCTTATTTTTCTGGTTACTGATGGTGCTGTTGATGATGAAAGAGAGATATGCAATTTTGTGAAAAACTGTGTCACTAGTTTGCAATCAATTCGTAC ACCGCGTGTATGTACTTTTGGCATAGGTTTATACTGTAATCATTACTTCCTGCAAATGCTAGCACAAATTGGGAGGGGTCACTATGATGCAGCTCATGAT TTAGATTCGATTGACTTTCGAATGCAAAGGCTATTCAATACTGCTTCATCAGTCATAGTTGCTGATATAACCATTGAAAGTTTAGAAGATCTTGAATTAC AGTTATTCCCAAATCATATTCCAGATCTATCATTGGGAAGTCTGTTCATCATATCGGGGAGGTGCGATGGAACTTTTCCTGAATCAGTTAAAGTTACTGG TACTTTGGCAGATATGACCAACTTTGTCATGGAGCTTAAGGTGAAAAGAGAAAAGGATATGAAACTCAGTAATATTCTTTCAAAGAGACATATAGACCTT GTCACTGCTGATGCATGGTTATTAGAAAATGAAGAGTTGAAGGAGAAGGTTTGTATTCAACATACATTTTTAGTTTTTATCTTTGAAAAAGAAACTATTG AAGAGAAAATTTGAAAAGACCAGTATACATTTAAGCATTGATCACAAACAAAATCATGGTGCTGATTTAGTGATTTTGTGCACACTGACAGAAAGGGTTA AAGGGGGGTCAATTAAGCTGGATTGAAAAGTGAAATGTTTTGGAAATTGTTTCTGCTATCTAGTTTCATATATATATTTTAGATTATTAAATTGTGACAT AATGTAAATATTTGCTTTGCTTTCTTTTCTTTGTTTTAATATCAGCAAGTATGTTAGGATAAATATGGATTTTCACTTTAGTATAGTGGTGTTGATAATT TGATATGTTCTCCACTGGTAATAGTATTTTACGTTAGTTGCTGCACCACACATCTGTAAACAAGTGCCAAACTTCTCTCTACTAGGTTATTAAAATGAGC ATTCAAAATAAAGTTCCATCTGAGTACACCTGCATGGTTCTCGTGGAGAACAATGGACTGAAGAAGGAACCTAAATCTGAACCATTTCTGTTACAAAAGG TAAACCTTTACCTTAGAGTTTTAGAAAAAATAAGGGCCAAGTTTAATTCCCTCTACTTCATAAAATATAAAGTACATGTTTTAAATTGTGATCCATAGTC ACAATTGAACTTACAATCTTGCGGTTTTGGTTGTATCTGCAACCACATCTCGACCATAATTGCAGCCGCATTTAGATTATCTATAATTGCGATAAATGCA ACCTAACCTCACCCGTGACTACAAATTAAAACATAGCATCATAGTTCCATATCCTGTTGCATAATATGTTTAATTCCCTACTCCAAAACAGATATACAGC AAAGTTATCCTCCAAAGGATAGACCTTGACAACCAGAAGTTATTCCTTGGAGGTATGAGTCTTGGATTCGGCGACATAAAAGCAACTGCTAAGAACATTC CACCAGCAATAAAAGAAGCAAAACCA BLAST |
Tissue | pods |
Gene name | LI_gene_180648; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516304
Blastp | Inter-alpha-trypsin inhibitor heavy chain H4 from Homo with 27.23% of identity |
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Blastx | Inter-alpha-trypsin inhibitor heavy chain H4 from Homo with 27.73% of identity |
Eggnog | von Willebrand factor, type A(COG2304) |
Kegg | Link to kegg annotations (3700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461918.1) |
Pfam | von Willebrand factor type A domain (PF13768.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |