Ll_transcript_514141

Id TrinityTRINITY_DN50876_c0_g2_i26
Name TranscriptLl_transcript_514141
SequenceTAATAATCAAACCAAACCAAACCAAACCAAACATTCTTATCGGTTTGGTTCCTAATCTTCCCATAAAACAAAACCAAACTAGACTAGGTTGTTGAGAATA GCAACCAAAATTCCTTTGAAGAGGAGGTCATGTATCCAACTAGGATGAGAAGTATAGTGTTTTTTTAATCTCATCAATGCCTACTTTCTATTCAGCCGTT GAATTTTTCTGAAGAAAAAATAAATTAATAGCCACATTGGTATTCTTTGCTTTAAAAAAGGGAACTCAGTTAGTTAAGTATAGTCGGAAAGGGAAGCCAA AATTTTGTCCATTCAGGCTCTCACCGGATGAAACATCACTGATTTGGATTTCTCGCGGAAAGGAAAAGAAACTGAATTTATCTTCTGTTACACGAATCAT CGCTGGACAGAGAACAGCTGTCTTTAGAAGATATTTGCGCCCTGAAAAGGATTATCTGTCATTTTCACTTATTTACAGAAAAGGGGAACGATCACTTGAT TTGATCTGCAAGGACAAAGTTGAGGTTGAGGTATGGTTTGAAGGCCTCAAGGCATTAATTTCTACTGGAACGCGTATTAGGCGCACTAGAAGTGACTTTA CTGATGATAGCATTGACTTGGGTCAGAATGACCGTCCTTCCTTTGGGACACTAGATTTTACTTCAAGCATTGTTCGTGGTAGGTTTTCAGTTGACTCAGA TGTAGGGCCAGAACGTGCAAATGTGCCAATAAGGACAAGTATTGGAGATGGTTCCCGTGTTAGTGTGTCAAGTATTGGCTACGCAAGTAGTGTAGCATCA GGACCAGATGACTTCGAGTCTCTAGGTGATGTTTATATATGGGGAAAGGTTTGGACAGACGGGATTTCATCTGATGGGTTGGGGAGTCAAGTCCCTTCTA AGATAGATGTTCTTGCTCCTAAGGCATTGGAATCTAACGTCGTTATTGATGTTTATCAGATAGCTTCTGGTGTACGTCACATTGCTCTAGTTACAAGGCA AGGAGAGGTTTTTACTTGGGGAGAGGAATCTGGTGGAAGACTTGGTCATGGGTCTGATAAAGATTTTTGTCAGCCACATCTTGTGGAGTCCCTGGCAATG ACTAGCGTGAGTTTTGTTTCATGCGGTGAATTTCATACTTGTGCTGTATCTACATCTGGTGATCTTTACACCTGGGGTGATGGGACACATAATGTTGGAC TTCTCGGTCATGGCACTAATGTTAGTCACTGGATACCAAAGAGGGTCAGTGGCCCTTTAGAAGGACTTCAGGTTGTATCTCTAGCTTGTGGCTCATGGCA TTCAGCATTGGCAACTTCCAATGGCAAATTGTTTACCTTTGGTGATGGAAGATTTGGTGTGATGGGCCATGGTGATCGAGAGAGTGTGTTATATCCAACG GAGGTACAATTATCGAGTGGACAAAAGGCTATTAAGGTCGCGTGTGGAGTATGGCACACAGCAGCCATTATAGAGGTAACGGATCCGTCTGTTTCAAATG CTTCATCCAGAAAGCAGCTCTTCACATGGGGTGACGGTGACCAATATCGTTTGGGACATATTAACAAGGAAACCTACCTTCAACCGACTTGTGTATCTAC GCTTGCTGAATATGATTTTCAGCAGGTAGCATGTGGGAACACTATGACTGTCGCACTCACTCTATCTGGTCATGTCTTTATTATGGGTAGTAATGCATAC GGCCAAATTGGAAATCCTCTCTCTGATGGAAAAGTGCCAATTCTTGTCCGAGATAAGTTGGTAGGTGAGTGTGTGGAGGAAATATCATGTGGATCACATC ATGTTGCTGTGTTGACTTCAAGAAGTGAACTATATACTTGGGGGAGAGGCGCCAATGGAAGATTGGGACATGGAGACATCGATGACCAGAAATCTCCAAA ATTGGTAGAAGCCTTCAAAGATAGGCATGTAAAGAATATTTCATGTGGCTCTAACTTTACAACTTGTATATGCATACATAAATGGGTCTCTGGAGCAGAT CAATCTCTTTGTACTGGTTGTCGGCAACCTTTTGGTTTTACTAAAAAAAGGCATAATTGCTATAATTGTGGATTGGTGCATTGCCATGGTTGTAGTTCCA AAAAGGCAATGAAGGCAGCGTTGGCTCCAACACCAGGAAAACCGCATCGTGTATGTGATAATTGTTATGCAAAACTAAGTTCTGTCTCTGAGACTGGTGC TTTTTTTAATAAAGAAGCTACTCGTCCACGTAGTTCCATACATGGAAGCGAAAGGCTTCCCCGGGGAGAAGTAAGGTCTTCAAGAACACTCTTGTCTCCC ATCACAGATCCAGTAAAATACCTTGAGATAAGAACTAGTAAGCCTGGAAGTAAACATGACTCTTCTTCTATAGTCCGAGCTTCTCAAGTTCCTTCACGTT TACAATTGAAAGATGTTGCATTTCCAAGTTCATCGAGTACAATGCAGAATACTTTCAAGCCTGTTATATTTCCAAGCCAACCTACAATCCAACCTCCAGC TCCAGCTTCACCAGTTATTTCAAGACCTGCATCGCCATATTCAAGAAGACCAAGCCCGCCACGTTCCACCTCCCCTGGATTTTCGAGAAGTCTTATTGAT AGTTTAAAGAAGAAAAATGAACTTTTGAATCAAGAAGTCTCAAAATTGCAAAAACAAATTCGAAATTTGAAGCAGAAGAGTGACATGCAAGAAATGAAGA TTGAACAGCTACAGAAAAATGTTGAGGGAGACGCCTCATTGGCCGGACAGGAATCTTCTAAGCATAGAGTAGCAAAGGAATTTATTAAGTCCATGAAAGA TCAGTTGATCGAAGTGACTGAGAAGTTTCCATCTGATATGTCTGGAAGTGAAACCTTGAGAACCATGCAAGCTCAAGCTAAAGATTTTCTTGAAGAAAAA ACAGAATTTGAATCTACTTCCCTCGCACCGAGCCTCGAGTCTGTGCAACAAAGTGCAGCCGATATACCTGCTTCCGAGAGTGACTCTGCTGAACTGCAAG AACATAGACCGGAAGAAAATGCTGCTGCTGCTGTTGCTGAGGCCAATCCATCAATAGATGAAGGAAATGTTCTTCAAGAAAGGAGCAGACTATTCGAATC TAGTACAGAAGTGCCTATACCAACTTCAAGTAGTTCAACAACAATTGACTCACATAAATGTGGGAAAGAAGGAGAAACATCAGTAATTGAACAATTTGAG CATGGTGTGTATATCACTGCCATAGTACTACCTAGTGGTGCCAAAGTATTCAAGCGAGTTAGATTCAGTAAGCGAAAATTCGATGGGCATCAAGCGGAAG AATGGTGGAACCGGAACAGAGATCTGGTGTACAAAAAATATAGTCCAGCAGGTACTAAGGATGCAGCAGGAACTGGTTCATCTGCAACACTGCCACATTC TGAAGACAATGTTGAGGCATCACCTTCTAAAATGTAGCTTTTTTATCTGCATAGGCTTCACCATACTCTCATGAAGTGATATAAAATCAGAAGCAGATTC AATCTACTAAGTGGAAACAAATCTGTATTAGGTAGGTTAGTGCAAAAACTCTACAGCATTATATACTGGTCTAGATAAAACCTGCAAGAATCAAATTGAT TTCTTTCTACCATACTATCCGGACTATCCGGATTTCTTTCTACCATGCTATCTGGACTATCCGGATTTCTTTCTACCGTAGTATCTGGACTATCCGGATT TCTT BLAST
Tissuepods
Gene nameLI_gene_180664; 
Additional informationdetails; 

Expression of Ll_transcript_514141

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_514141
BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 49.08% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 48.89% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019431965.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF13540.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;