Id Trinity | TRINITY_DN50877_c1_g1_i3 |
---|---|
Name Transcript | Ll_transcript_516729 |
Sequence | TATAGTCTTTATTACACAACTGAAGAGGTGTCCCTCGCGTCTAAACAGGGTACGAGGTGAAGAAACTTGTCTGTGCGAGTGTGAAAGTGAAAGTGAAACC CATGTTTCAACAGTGATCTTATATTCAGTGACGTTGTTTTTCCTCTGTATAATTGCATTCCCCTATTGTCAATAACAGTCAACATTCTCCTTCTTAATGC TCTTCCCTCATTTCTTTCACCTTCCTCATTCCCATTTCCCTTTCATCTATTCAATACAACAATCTCGATCTCCATTCATAACCCTTCATCATTTTCATTC TCATGGCCAACCCTACACACCCTAAACTGGGTCCTCACAACACTCCAATTCAACCTTCATCATCTCCTTCCATTTTATCACCTCACAGTGCCAATGGGGG TAAATCTGTCACTTCAATTATTCAATTGAGCACACCTCCTGGACCTCCTGTGTTTACTTCGCCTGTTCGCCCGGCTGCTGTTCCTTTTCGCACCTCCCCT GCCTTGCCTCAGCCCCTCGCTTTTTCGTCCGATTCGCCTTTGCCAACATCATCATTACCACAGTTTTCCAATGGGTCTGTTCAATTGCCGCGCCAAGTTT CTGGTGGGGTAGAGGATCATGTTCCTCTTGGCCTCGGGGAATCAAATTTTGTTCTTTTCTCAGCTCATAAGGTATTGAAACAGAAGAAACAAGCTAATGT ACCTAGTCTGGGTTTTGGGGCATTGATCTCTCCTGGGAGGGAGGTCTTAACAGGTTCTGAAGTAATACAGCGTGATCCACACCGATGCCAAAGCTGTGGA TCTTATTCAAATATCTATTGCAACATATTGCTTGGGTCAGGCCAGTGGCAATGTGTAATATGTCGGAAACTGAATGGAAGTGATGGTGAGTACATCGCTC CCAGAAAAGAAGACCTTCGCAGATTTCCGGAACTATCGTCAACCGTGGTCGACTATGTTCAAACTGGGAACAACAGACCTGGTTTTGTGCCAGTTTCAGA TTTGAGAGTGTCTGCACCAGTTGTTCTTGTGATAGATGAATGTTTAGATGAATCTCACTTACAACATTTACAGAGTTCTTTGCACGCTTTTGTTGATTCT CTCCCTCCAACAACTAGGCTAGGAATTGTACTATATGGCCGTACTGTATCAGTTTATGACTTTTCAGAGGAGTCAATTGCTTCTGCTGATGTGCTGCCCG GGGACAAATCACCACTTGAGGAATCTTTGAAAGGCTTTATCTATGGTACTGGCATATACTTGTCGCCGATGAATGCTTCACTGCCCATAGCGCATGCCAT ATTTTCATCATTGAGACCATACAAGTCGAACATTCCAGAAGCATCCAGAGATCGATGCCTAGGAACTGCGGTTGAGGTTGCTCTTGCTATTATTCAGGGG CCATCTGCAGATATGTCACGAGGGGTAGTCAAAAGGTCAGGTAGCAATAGCAGAATTATTGTATGTGCTGGTGGGCCGAACACTTATGGTCCCGGGTCTG TTCCTTATTCTTTTGATCATCCTAATTATCCTTATATGGAAAAGACAGCATTAAAGTGGATGGAGAATCTTGGTCACGAGGCTAATCGTCACAATACTGT TGTTGACATTTTATGTGCCGGAACATGCCCTGTAAGGGTTCCAATTTTACAGCCTCTTGCAAAAGCATCAGGTGGAGTTCTGGTTCTTCATGATGATTTT GGGGAAGCCTTTGGCGTTAATTTGCAAAGAGCGGCTGTCAGAGCAGCAAGCTCTCATGCCTTGTTAGAATTACGCATGTCAGACGGTATTCTTATAACTC ATGTTGTGGGTCCCGGTGAAGAGGCACATGTAGATACCCATGTGACATTTAAAAATGACTCTGCTCTTTATATTCAAATGCCAAGTGTTGAAGATACACA GAGCTTCGCGCTCTCCATGGAAACTGAAAGAGACATCAAAAGTGATCATGTATTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCAGGCTGATGTG TCAAGGGTCATTACTGTTAGACTGCCAACTGTAGATAGTTTTTCAGCATACCTTGAGAGCATTCAGGATGAAGTGGCTGCTGTCCTCATCGCGAAGAGGA CTCTGTTAAGAGCTATAAGCCATTCTGATGCAATTGACATGCGAGCAACAATAGATGAAAGAATCAAAGATGTTGCATTAAAATTTGGCTCCCAAGTACC GAAATCTAAACTGCACTGCTTTCCAAAGGAACTTTCTCTCTTACCCGAGCTCCTTTTCCATCTCAAAAGAGGACCACTATTGGGAAACATTATTGGCCAT GAAGATGAGAGGTCTGTGTTGCGGAACCTGTTTCTAAATGCATCCTTTGATCTATCACTCCGAATGGTGGCTCCTCGATGTCTAATGCACAGGGAGGGGG GCACTTTTGAGGAGCTACCAGCTTATGATCTCACAATGCAGTCTGATACTGCTGTTATTCTTGATCATGGCACTGATGTCTTCATTTGGTTGGGTGCTGA ACTTGCAGTTGATGAAGGAAGAAGTTCTGCAGCTCTGGCCGCTTGCCGGACATTGGCTGAAGAGCTAACTGAATTCCGTTTTCCAGCTCCTCGTATACTT TCATTCAAGGAGGGTAGCTCACAGGCTCGATATTTTGTTTCTCGTCTCATACCAGCACACAAGGATCCTCCGTATGAGCAGGAGGCAAGATTCCCACAAC TTAAGTCATTGACAACAGAGCAGCGAACAAAGCTAAAAAGCAGTTTCGTGCACTTCGATGATCCTAGTTTATGTGAGTGGATGCGAAGTTTGAAAGTGGT ACCACCACAGCCAAACTGATTTACAGTCAAGTTCCTAGGAACTTTGTCTTCCAATCAGCAGGGATTTTTTTGTTTATGTGATTTGTGTAATACAATGGTC ATGCATATGTTCCTTAAATGTCTTTGCTTATGTGCTTCCCATTGTTTTTCTTCCCTTCAGAGAAATATATACACTGTTGTCACTGACGGATTTTAGTGCT TTTGTTTTTTTAAGGGATTCATCAGAGTTTACATGACTGCAGTTAACATGTTATCATTGACCAATAAACGATTCTTCCCATTTTATTTTTGGGTATTGAC ATTCCCAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_180670; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516729
Blastp | Protein transport protein SEC23 from Eremothecium with 24.81% of identity |
---|---|
Blastx | Protein transport protein SEC23 from Eremothecium with 25.06% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AGOS_AEL272W) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_016205685.1) |
Pfam | Sec23/Sec24 zinc finger (PF04810.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |