Ll_transcript_516729

• Id Trinity: TRINITY_DN50877_c1_g1_i3
• Name Transcript: Ll_transcript_516729
• Sequence: TATAGTCTTTATTACACAACTGAAGAGGTGTCCCTCGCGTCTAAACAGGGTACGAGGTGAAGAAACTTGTCTGTGCGAGTGTGAAAGTGAAAGTGAAACC CATGTTTCAACAGTGATCTTATATTCAGTGACGTTGTTTTTCCTCTGTATAATTGCATTCCCCTATTGTCAATAACAGTCAACATTCTCCTTCTTAATGC TCTTCCCTCATTTCTTTCACCTTCCTCATTCCCATTTCCCTTTCATCTATTCAATACAACAATCTCGATCTCCATTCATAACCCTTCATCATTTTCATTC TCATGGCCAACCCTACACACCCTAAACTGGGTCCTCACAACACTCCAATTCAACCTTCATCATCTCCTTCCATTTTATCACCTCACAGTGCCAATGGGGG TAAATCTGTCACTTCAATTATTCAATTGAGCACACCTCCTGGACCTCCTGTGTTTACTTCGCCTGTTCGCCCGGCTGCTGTTCCTTTTCGCACCTCCCCT GCCTTGCCTCAGCCCCTCGCTTTTTCGTCCGATTCGCCTTTGCCAACATCATCATTACCACAGTTTTCCAATGGGTCTGTTCAATTGCCGCGCCAAGTTT CTGGTGGGGTAGAGGATCATGTTCCTCTTGGCCTCGGGGAATCAAATTTTGTTCTTTTCTCAGCTCATAAGGTATTGAAACAGAAGAAACAAGCTAATGT ACCTAGTCTGGGTTTTGGGGCATTGATCTCTCCTGGGAGGGAGGTCTTAACAGGTTCTGAAGTAATACAGCGTGATCCACACCGATGCCAAAGCTGTGGA TCTTATTCAAATATCTATTGCAACATATTGCTTGGGTCAGGCCAGTGGCAATGTGTAATATGTCGGAAACTGAATGGAAGTGATGGTGAGTACATCGCTC CCAGAAAAGAAGACCTTCGCAGATTTCCGGAACTATCGTCAACCGTGGTCGACTATGTTCAAACTGGGAACAACAGACCTGGTTTTGTGCCAGTTTCAGA TTTGAGAGTGTCTGCACCAGTTGTTCTTGTGATAGATGAATGTTTAGATGAATCTCACTTACAACATTTACAGAGTTCTTTGCACGCTTTTGTTGATTCT CTCCCTCCAACAACTAGGCTAGGAATTGTACTATATGGCCGTACTGTATCAGTTTATGACTTTTCAGAGGAGTCAATTGCTTCTGCTGATGTGCTGCCCG GGGACAAATCACCACTTGAGGAATCTTTGAAAGGCTTTATCTATGGTACTGGCATATACTTGTCGCCGATGAATGCTTCACTGCCCATAGCGCATGCCAT ATTTTCATCATTGAGACCATACAAGTCGAACATTCCAGAAGCATCCAGAGATCGATGCCTAGGAACTGCGGTTGAGGTTGCTCTTGCTATTATTCAGGGG CCATCTGCAGATATGTCACGAGGGGTAGTCAAAAGGTCAGGTAGCAATAGCAGAATTATTGTATGTGCTGGTGGGCCGAACACTTATGGTCCCGGGTCTG TTCCTTATTCTTTTGATCATCCTAATTATCCTTATATGGAAAAGACAGCATTAAAGTGGATGGAGAATCTTGGTCACGAGGCTAATCGTCACAATACTGT TGTTGACATTTTATGTGCCGGAACATGCCCTGTAAGGGTTCCAATTTTACAGCCTCTTGCAAAAGCATCAGGTGGAGTTCTGGTTCTTCATGATGATTTT GGGGAAGCCTTTGGCGTTAATTTGCAAAGAGCGGCTGTCAGAGCAGCAAGCTCTCATGCCTTGTTAGAATTACGCATGTCAGACGGTATTCTTATAACTC ATGTTGTGGGTCCCGGTGAAGAGGCACATGTAGATACCCATGTGACATTTAAAAATGACTCTGCTCTTTATATTCAAATGCCAAGTGTTGAAGATACACA GAGCTTCGCGCTCTCCATGGAAACTGAAAGAGACATCAAAAGTGATCATGTATTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCAGGCTGATGTG TCAAGGGTCATTACTGTTAGACTGCCAACTGTAGATAGTTTTTCAGCATACCTTGAGAGCATTCAGGATGAAGTGGCTGCTGTCCTCATCGCGAAGAGGA CTCTGTTAAGAGCTATAAGCCATTCTGATGCAATTGACATGCGAGCAACAATAGATGAAAGAATCAAAGATGTTGCATTAAAATTTGGCTCCCAAGTACC GAAATCTAAACTGCACTGCTTTCCAAAGGAACTTTCTCTCTTACCCGAGCTCCTTTTCCATCTCAAAAGAGGACCACTATTGGGAAACATTATTGGCCAT GAAGATGAGAGGTCTGTGTTGCGGAACCTGTTTCTAAATGCATCCTTTGATCTATCACTCCGAATGGTGGCTCCTCGATGTCTAATGCACAGGGAGGGGG GCACTTTTGAGGAGCTACCAGCTTATGATCTCACAATGCAGTCTGATACTGCTGTTATTCTTGATCATGGCACTGATGTCTTCATTTGGTTGGGTGCTGA ACTTGCAGTTGATGAAGGAAGAAGTTCTGCAGCTCTGGCCGCTTGCCGGACATTGGCTGAAGAGCTAACTGAATTCCGTTTTCCAGCTCCTCGTATACTT TCATTCAAGGAGGGTAGCTCACAGGCTCGATATTTTGTTTCTCGTCTCATACCAGCACACAAGGATCCTCCGTATGAGCAGGAGGCAAGATTCCCACAAC TTAAGTCATTGACAACAGAGCAGCGAACAAAGCTAAAAAGCAGTTTCGTGCACTTCGATGATCCTAGTTTATGTGAGTGGATGCGAAGTTTGAAAGTGGT ACCACCACAGCCAAACTGATTTACAGTCAAGTTCCTAGGAACTTTGTCTTCCAATCAGCAGGGATTTTTTTGTTTATGTGATTTGTGTAATACAATGGTC ATGCATATGTTCCTTAAATGTCTTTGCTTATGTGCTTCCCATTGTTTTTCTTCCCTTCAGAGAAATATATACACTGTTGTCACTGACGGATTTTAGTGCT TTTGTTTTTTTAAGGGATTCATCAGAGTTTACATGACTGCAGTTAACATGTTATCATTGACCAATAAACGATTCTTCCCATTTTATTTTTGGGTATTGAC ATTCCCAAAG
• Tissue: pods
• Gene name: LI_gene_180670;
• Additional information: details;

Expression of Ll_transcript_516729

FPKM

• PAB: 1.5
• PNAB: 8.4
• PS1: 8.2
• PS2: 7.5
• PS3: 8
• PW1: 5.9
• PW2: 5.6
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_516729

• Blastp: Protein transport protein SEC23 from Eremothecium with 24.81% of identity
• Blastx: Protein transport protein SEC23 from Eremothecium with 25.06% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AGOS_AEL272W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_016205685.1)
• Pfam: Sec23/Sec24 zinc finger (PF04810.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;