Ll_transcript_514519

• Id Trinity: TRINITY_DN50881_c4_g1_i1
• Name Transcript: Ll_transcript_514519
• Sequence: CAAATACACATGGATTGTATTAGTTTCTTTGCAATACAATTGAATTATACAAAAAAAAACGGCCCTTATTCCCTTAAACAAACATCAAACCTTATAACGG GTATAACGACAGCGAGTGAGGGAGAATGAACTCATTGAATTTGAGATTGAAACCCTTAGCCACCATGAAGAGAAAAAGAACAACCAAAAAACCGGTTGCG CCACCTTCCTCCACCCCTCCAGCACCACCAACACAACCCAAAACCCTCCTCAAAACCTGCCACTCCACACCAAAACCACCAAGCACCTTCACCAAATCCC TAAAATTTCCAGAACCTTCTTCCCTTAACGTGTGGATCCCACTCAATCTCACTCGCGAAGAGCTCTCCTTACCGTTAACCTTCCCAACCGGTCAAACCTT CCGCTGGAAAAACACCGCTCCTTCTCAATTCACCGGCGTCGTTGGGTCCCACATCGTATCCCTAACCCACCTCCAAAACGGCGACGTTTCATATTGCCTT CACAGAACTCACGATGCCGTTGCCGCCAGAACGGCCCTGCTCGATTTTCTCAACGCCGGCGTGTCTCTTGCCGGAATCTGGAAGGTGTTCTCGGACTCCG ACGAGAGGTTTGCTGAGCTGGCAAGGCATTTGGGTGGGGCCCGCGTTCTGAGGCAGGAACCGTTTGAGTGTTTGATTCAGTTTTTGTGTTCTTCGAATAA CAACATTGGGAGGATTACGAAGATGGTGGATTATGTTTCGTCTATTGGGAATTACTTAGGCTCTGTTGAAGGTTTTATGTTCCATTCTTTCCCTACTTTG GAGCAGCTTTCTTTGGTTTCAGAGGAAGATCTTAGAAAAGCTGGTTTTGGTTATAGGGCTAAGTATATAATTGGCACGGTGAATGCTTTACAATCAAAAC CTGGTGGAGGGGAAGAATGGCTTCGGTCCCTGCGCAAATTGGATCTTGAAGATGTTACATCTGCCCTTTCTACTTTACCTGGAGTAGGTCCTAAAGTGGC TGCTTGCATAGCTCTCTTCTCGCTTGATCAGCATCATGCCATTCCTGTTGACACACATGTGTGGCAGATTGCCACGAAGTATCTCTTACCTGAGCTTGCA GGTTCCCGATTGACACCGAAGCTCTGTAATCGTGTTGCAGAGGCATTTGTAACCAAGTATGGTAAATATGCTGGCTGGGCTCAAACTCTACTCTTCATAG CTGAATTACCTTCACAAAAGGTCCTCCTACCTTCACATTTGTGTACAATTGATCAGCACAATCACACAAAGAAAGAAGACAGTGAAATACTTGGTTAGAA AATCAACTGTGGTATTCCAATTTTGATCTTATAAACTAGGCATTCAACATCCAGCATTCTGGCTTCACCAACATCAGATATTAAAATCTTTACTGATCAT TTTCTCAACTATAGCGAATTCTACTGACGGCATGGACCTCCGGATATAGATGCACAAGACTTAGGTGAGACGAGCAGCTGTCAAGACTTATGAGATAGAA CATGGTGAGATCACATTGCTAGATCGAGAATGACGCCTAAGCTGTTTAAGCAACACCTAACAGCTGGTATCAAAATATTTACCTTTCATTTTCTCAACTA CAGTGAGATCTACATCTGGTGTTCTCCAAAAGATCTAGAGTGATATCTCTAAATGGAGGATGATATCTAAACTGTGGATGAGGGTTTTGCTGCAGTTCAT CACAAACATGCCCTTTGATTCTATACATGTAAATGAACATGTTCTATGTTGAAAACGTTTTTTGTCCACTGAATGTTGATTTGCACATTTATGTTGTGAT TGGCTAAAGCTTCCTAATGGTGGATGATTGGAAGATATACATGCCAAATGGTCAAAGCATCTTTTTGGAGCCTATCTTTTAAATTAAAGGATTATAATTA TATCTTTCTTTTTGTGTACGATTAGGGTTGGAGGAAAATTCACAACACAAAGGTGTGACCAAACTCTTCAGAAATATAAATGAGGAAAATGTTTAATGTT CTTTGCATTTCCAACGATTATGTTTAATGTTTTTTTTATATATCACAG
• Tissue: pods
• Gene name: LI_gene_180704;
• Additional information: details;

Expression of Ll_transcript_514519

FPKM

• PAB: 3.9
• PNAB: 4.4
• PS1: 7.1
• PS2: 1.9
• PS3: 3.1
• PW1: 6
• PW2: 3.7
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514519

• Blastp: N-glycosylase/DNA lyase OGG1 from Arabidopsis with 64.25% of identity
• Blastx: N-glycosylase/DNA lyase OGG1 from Arabidopsis with 69.65% of identity
• Eggnog: Glycosylase(COG0122)
• Kegg: Link to kegg annotations (AT1G21710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438584.1)
• Pfam: 8-oxoguanine DNA glycosylase, N-terminal domain (PF07934.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;