Ll_transcript_514521

• Id Trinity: TRINITY_DN50881_c4_g1_i2
• Name Transcript: Ll_transcript_514521
• Sequence: CAAATACACATGGATTGTATTAGTTTCTTTGCAATACAATTGAATTATACAAAAAAAAACGGCCCTTATTCCCTTAAACAAACATCAAACCTTATAACGG GTATAACGACAGCGAGTGAGGGAGAATGAACTCATTGAATTTGAGATTGAAACCCTTAGCCACCATGAAGAGAAAAAGAACAACCAAAAAACCGGTTGCG CCACCTTCCTCCACCCCTCCAGCACCACCAACACAACCCAAAACCCTCCTCAAAACCTGCCACTCCACACCAAAACCACCAAGCACCTTCACCAAATCCC TAAAATTTCCAGAACCTTCTTCCCTTAACGTGTGGATCCCACTCAATCTCACTCGCGAAGAGCTCTCCTTACCGTTAACCTTCCCAACCGGTCAAACCTT CCGCTGGAAAAACACCGCTCCTTCTCAATTCACCGGCGTCGTTGGGTCCCACATCGTATCCCTAACCCACCTCCAAAACGGCGACGTTTCATATTGCCTT CACAGAACTCACGATGCCGTTGCCGCCAGAACGGCCCTGCTCGATTTTCTCAACGCCGGCGTGTCTCTTGCCGGAATCTGGAAGGTGTTCTCGGACTCCG ACGAGAGGTTTGCTGAGCTGGCAAGGCATTTGGGTGGGGCCCGCGTTCTGAGGCAGGAACCGTTTGAGTGTTTGATTCAGTTTTTGTGTTCTTCGAATAA CAACATTGGGAGGATTACGAAGATGGTGGATTATGTTTCGTCTATTGGGAATTACTTAGGCTCTGTTGAAGGTTTTATGTTCCATTCTTTCCCTACTTTG GAGCAGCTTTCTTTGGTTTCAGAGGAAGATCTTAGAAAAGCTGGTTTTGGTTATAGGGCTAAGTATATAATTGGCACGGTGAATGCTTTACAATCAAAAC CTGGTGGAGGGGAAGAATGGCTTCGGTCCCTGCGCAAATTGGATCTTGAAGATGTTACATCTGCCCTTTCTACTTTACCTGGAGTAGGTCCTAAAGTGGC TGCTTGCATAGCTCTCTTCTCGCTTGATCAGCATCATGCCATTCCTGTTGACACACATGTGTGGCAGGTTTGCTCTTTGACTTCGTAGAAGCACTTCAAA TTTGTCATTTATTGTTTAATGTTGGTGCTTATGATTTTACTTGCTAGCCATAGAGTGGGCTGCTATATTTGTTAATACAAGAAAGCAAACTTCAGAGCAA AAAAGTGGATTATATTATATTTTTTGGAAATTATATGTGAATTTCATTGTACCTTTAGTAGGATTCTTGATCCTCTTGTTTGCAATTTCTGCTTTATTAA TTGAGTTATTCTTTTAATGAACGGTATCATTTATGCTTCACTGGTTGTCTCAGCTCGTAGATGTTCTCATTTGATTTCTATGTATTCTTGATTGTTAATT TGCAATCATTATTTAAAACTCGGGTAAGATTGCCACGAAGTATCTCTTACCTGAGCTTGCAGGTTCCCGATTGACACCGAAGCTCTGTAATCGTGTTGCA GAGGCATTTGTAACCAAGTATGGTAAATATGCTGGCTGGGCTCAAACTCTACTCTTCATAGCTGAATTACCTTCACAAAAGGTCCTCCTACCTTCACATT TGTGTACAATTGATCAGCACAATCACACAAAGAAAGAAGACAGTGAAATACTTGGTTAGAAAATCAACTGTGGTATTCCAATTTTGATCTTATAAACTAG GCATTCAACATCCAGCATTCTGGCTTCACCAACATCAGATATTAAAATCTTTACTGATCATTTTCTCAACTATAGCGAATTCTACTGACGGCATGGACCT CCGGATATAGATGCACAAGACTTAGGTGAGACGAGCAGCTGTCAAGACTTATGAGATAGAACATGGTGAGATCACATTGCTAGATCGAGAATGACGCCTA AGCTGTTTAAGCAACACCTAACAGCTGGTATCAAAATATTTACCTTTCATTTTCTCAACTACAGTGAGATCTACATCTGGTGTTCTCCAAAAGATCTAGA GTGATATCTCTAAATGGAGGATGATATCTAAACTGTGGATGAGGGTTTTGCTGCAGTTCATCACAAACATGCCCTTTGATTCTATACATGTAAATGAACA TGTTCTATGTTGAAAACGTTTTTTGTCCACTGAATGTTGATTTGCACATTTATGTTGTGATTGGCTAAAGCTTCCTAATGGTGGATGATTGGAAGATATA CATGCCAAATGGTCAAAGCATCTTTTTGGAGCCTATCTTTTAAATTAAAGGATTATAATTATATCTTTCTTTTTGTGTACGATTAGGGTTGGAGGAAAAT TCACAACACAAAGGTGTGACCAAACTCTTCAGAAATATAAATGAGGAAAATGTTTAATGTTCTTTGCATTTCCAACGATTATGTTTAATGTTTTTTTTAT ATATCACAG
• Tissue: pods
• Gene name: LI_gene_180704;
• Additional information: details;

Expression of Ll_transcript_514521

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.5
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514521

• Blastp: N-glycosylase/DNA lyase OGG1 from Arabidopsis with 60.66% of identity
• Blastx: N-glycosylase/DNA lyase OGG1 from Arabidopsis with 69.08% of identity
• Eggnog: Glycosylase(COG0122)
• Kegg: Link to kegg annotations (AT1G21710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438584.1)
• Pfam: 8-oxoguanine DNA glycosylase, N-terminal domain (PF07934.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;