Id Trinity | TRINITY_DN50887_c0_g1_i3 |
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Name Transcript | Ll_transcript_516788 |
Sequence | GTTCTAAGTTCTAACCTCATCGTTCAGGATTTCAATAATGCAACTTCCGTAACTAACTTCGATTTCTCTCTCTTCTCTTTCTCTCTCTAAAACTTAATAT CGCTTCTTCAACCGTTTTCGCTTACATTACGAGTGATCGATCGGAAAAATCAACGTCGCCGGAATCTTCCATCGCCGGCGATTCAGTTTCAAAATTATTT GACTGTTTTAGTATACAGTGAAAGAAAGAAATTAGAGTTTGATACTTTGAAGATTGATTGTGATGTTGATTTTTAACTTGAATGCTGATTCAAATGAGAA CGGTGATTTACTCGAGCTGTTGGAGAAGATTCCAGAAGCTTCTTCGGGGACTTCGAATTCATCAATAGTGAATGCTGATGGTTCTAGTAACATAGGAGGC GGCGATGACTCGTGCTGCACACGCGCCGGCAACGGTAGTGGCGTGTTCACCTTTGATTTCGGTATCATGAAGGTTGAAGGGAGGAATGAGGTTGTGACGC CGACGAAGGAGCTGTTTCCGATGAGTTCCGGGAATTGGAAGATGCAGCAACAGTCAACGGTGTCGTTTCCGGCGAGGAAGGGTGGCGTGGATCTCTTGTG GGAGCAAGGCGAAAACAGCGAGATGGTGAAGATGGTTCAGACTCAGAAACCGGTGAAGAAGAGTAGGAGAGGACCAAGGTCTCGGAGTTCACAGTATAGA GGAGTCACCTTTTACAGAAGAACTGGTCGATGGGAATCTCATATATGGGATTGTGGAAAACAAGTGTATCTGGGTAAGTCTTTACGGTAGAATGGTGAAT CTGTTATTAAGGATTGGTTTGAACTTTGAATAGCTAATTTGGTACATACTTATATAGTTACTCTATTATTGTATTAAGTGGCTAAAACAATTGTTTCCTT TGAAAATTTGTCTTGTTTGATTTGGGTGCGAGACAATGAAGTATCAGGTATGTGTGGTAATTATTATGGCCACTGATGATAGCTTTGTCTGGGTACAATT TGTGTAGGTGGATTTGACACAGCACATGCAGCAGCTCGGTGAGCATTTACTCCCTCTTTGTTTACAAATCTTGTAATACAATACATCCATGTCTATAATC AACTAATATCGAATTTTCATCCTGGAAATTATGTATATGGTTTGGATAATATAGATATTCATCTCTTTGTGCAGTGTATATGATAGGGCGGCAATTAAAT TCCGGGGAGTAGATGCAGACATAAACTTCAACGTAGAAGATTATGAAGAAGATTTGAAGCAGATGAGCAATCTAACGAAGGAGGAGTTTGTACACGTACT TCGCCGACAAAGCACTGGATTTCCTAGAGGAAGCTCCAAATATAGAGGTGTAACTCTGCACAAATGTGGAAGATGGGAAGCAAGAATGGGCCAATTTTTA GGCAAAAAGTACGTTTATCTCGGTCTTTTTGACACCGAGGTTGAGGCTGCAAGGGCTTATGACAAAGCAGCAATAAGATGCAGTGGCAAAGAAGCCCTCA CTAATTTTGACCCCAGCATCTATGATCATGAACTTAACCTTGAATCTTCAGGGAAAGCCGCAGAACACAATTTGGATTTAAGTTTAGGAAATTCGAGCTC TAAGCACAAGAATAATAAAACATTGGGGAGTCACACCCAAAATGCTGCAACTAATCACACTCCTAAGGTTCATGTAATATCTAAATATGATTCATTATAT TCTATATCGTTCACTTTTCTGTTTATTTTTCTGCTTATATGTCTCAACCACTTTTGTTTTTGCTGTTTATTTATATATATTTTCTCATTCAGCTGGTGAA TATACTACCAAAGGTATGTAGCAGAAGCCACATGGATGGGTATGGAGAGCCTCCTTTCAAGTCTTCTGGAGAGCCTCACAATTTTGCACATCATCTTCAC CCACCAAATTTTTATGTGGGTTTACCTTCTACAGTTAATTTATTTACCTCATATATATTACTCATATTAAAAGATTTAGATTTGAAAATAATATACTTAT TATGTCCAAAAACCTACCAGTAATAGTTTAATGATATTTTTAATAGTCTCTTATGTGTTTCCAAATATAAATGCAGCTTCCCAGCAGCAGCAATGGAGTC CGTACAGAAAGTGATCTTTCATTATCAATGAACAATCAACAAAAATGGCAATCAGGGCCTCCACTCTTTGTAGCAACTGCTGCAGCATCATCAGGATTCC CACCACAAATCATAAGACCCTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACAATCTCATGAGACCCTCTTCCTGATCCTTAAATATAGCACAAAA AATATATATTTTCTACCTTGCCATTTACATTCAAATAATCATATGCCACCTTAGTAATCTCTCTTTTATTAGTAAGGAAACATGGATGCAGTGTTAGAAA GACTTATATTGTTCATGTCCAAGTAACCCAGACCCCCCCTTAGGAAAAAGCACATACAAGACCAAAACTTTACTATCAAGGTGAAAGAAGGGGTAACAAA AGAAAAAAAAGAATCTAAATTTGGAAATCACTGATGGTTTTGGTTTTGGGTCAGTCAAAGTCACAAACAGACGAAATCTTTAACTAGATACTATCTATAT ATTCTGGCCTCTGACTAAAATTTTCTGATCTTATAAAAACTCTGATTTATTGCTTTTCTACATTATGTGGTATTTATGACAGCACCTATTCG BLAST |
Tissue | pods |
Gene name | LI_gene_180764; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516788
Blastp | AP2-like ethylene-responsive transcription factor TOE2 from Arabidopsis with 43.22% of identity |
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Blastx | Floral homeotic protein APETALA 2 from Arabidopsis with 73.03% of identity |
Eggnog | AP2(ENOG4110426) |
Kegg | Link to kegg annotations (AT5G60120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444681.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |