| Id Trinity | TRINITY_DN50887_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_516783 |
| Sequence | GCGAAGCATCCAATTGCATGCATGAAAGAGAAAATGTTTATATATTCCGTCTCTTCTGAACCCTGCATTTGTTCCTTTCACCCATCTTTCTATCTCTTAC CATGGAATCAAATTATCCATCATTTTTTCAACTCTCTCACATTCTAATCTCATCGCCGATTATTTGAACAACGCAACCGCCGTAACTAACTTCGTTTTCT CTGTTTCTTTCTCCTTTTTCCGATCGCTGATAATTTTCTCCGTCATAGTCGTAGTTACTGAACAAGCTTCAATTTCTGTGTTCTTCTTCGATTTATGTTT TTTATCGAGGAATCACTTTTTCTCTAAAACTTTTTACTCATCTTGAACAGTTTTGCTTACGTTACTTGTAATCGACCGGAAAGATCATCGTCGTTGGAAT CGTCCATCGCCGGAGATTTAGTAGCGAAGTTAGTTTACTATTTCAGCATAAAGTGAAAAACTAATAGTAAAACAGAAATTAGAGTTTGATTCCTTGAAGA TTAACTGCGATGTTGAATTTTAATTTGAATGCTGATTCAACTGAGAACGATGACTCACTCGAGGTGTTGGAAAGGTTTCCAGAAGCTTCTTCTGGAACCT CTAATTCCTCAATCGTGAATGCGGACGGTTCCAGCAACGGAGGAGGTGACGTGGAGTCGTGCTCCACACGCGCCGGAGGAGGAAGTGGCGTTTTCACCTT CGATTTCGGAATCATGAAGGTGAAAGGCATGAACAACGTTGTGACGCCAACGAAGGAGCTGTTTCCGATGAGTTCTGGAAATTGGAAGATGCAACAACCG TCAACTTCGTCGTCGTTTCCGGCGAGGAAGAGTGGCGTGAATTTCTCATTAGATGATGGCGAAAACAGTGGGACGATGAAGATTGTTCAGGCTCAGAAAC AAACGCCTAAACAACCAGTGAAGAAGAGTAGGAGAGGACCAAGGTCTCGGAGTTCACAGTACAGAGGAGTCACTTTCTACAGAAGGACCGGTCGTTGGGA ATCACATATCTGGGATTGCGGGAAACAAGTTTATTTAGGTGGATTTGATACCGCTGATGCTGCTGCTAGGTAGGAAATTACTGTACATGTTTAAAGTTAA GTTACTCTGTTATATAACGTCTTATTGAGATGTGGATTTGATTGTTGACTTGGATTTTCCATAATCTAGGGCATACGATCGAGCTGCTATCAAGTTCAGG GGAGTTGATGCTGACATCAATTTCAATCTCACTGATTATGATGATGATCTTAAACAGATGAAAAATCTCTCCAAAGAGGAATTTGTGCACATACTACGTC GCCAAAGCACTGGTTTCTCTAGGGGGATCTCCAAATACAGAGGAGTGACACTTCATAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAA AAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAGCGCAATGGAAGGGAGGCAGTCACTAAC TTTGAGCTAAGTACATATGAAAGTGACATGAAACCTGAAGCCATTAATGAAGCTGGCAGTCACAATCTAGACCTCAATTTGGGTATAGCAACCCCGGGAC ATGGACCCAAAGAAAACAAGGGGCAACTTCAGTTCCAGCCCTTTCCTTACAACATGCATCCCGGAAGAAGTGCAAGGATGGAGACTAATGTTAATTCAGT TATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_180765; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516783
| Blastp | AP2-like ethylene-responsive transcription factor TOE2 from Arabidopsis with 48.04% of identity |
|---|---|
| Blastx | Floral homeotic protein APETALA 2 from Arabidopsis with 75.56% of identity |
| Eggnog | AP2(ENOG4110426) |
| Kegg | Link to kegg annotations (AT5G60120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014623751.1) |
| Pfam | AP2 domain (PF00847.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |