Id Trinity | TRINITY_DN50887_c0_g2_i13 |
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Name Transcript | Ll_transcript_516812 |
Sequence | GTGGCTTTGATACCGCTCATGCCGCTGCTAGGGCCTATGATCGAGCTGCTATCAAGTTCAGGGGAGTTGATGCTGACATCAATTTCAATCTCATTGATTA TGATGATGATCTTAAACCGGTTGGGAATTTGATAAGGTTTTTGATGAATATGAATATAGATGGACTGTGTGAATAGTTTTTCACCATTTTGTTAATGATG GACAGTTGAAGAATCTCTCTAAAGAGGAATTTGTGCAAACACTACGTCGCCAAACTACTGGTTTCTCAAGGGGGAGCTCAAAATACAGAGGAGTGACACT TCAGAATTGTGGCCGTTCGGAAGCTCCAACGGGACAATTCCATGGCAAAATGGCTTATGACAAGGCAGCTATCAAGTGCAATGGAAGGGAGGCGGTGACC AACATTGAGCCATGTAAATATGAAAGCGACATGAAACCCAAAGCCATTAATGAAGGTGACAGTCACAATCTAGACCTCAATTTGGGCATAGCAACCCCAG GACATGGACCCAAAGAAAACAAGGAGAATCTTAAGTTCCAGCCTGTTCCTTACAACATGCATCTTGGAAGAAATTCAAGGGTGGAGACTAATGTTAATTC AGTTATTGATGGTCCAGCTTTGAAAAGTCTGGTTGTAACTGAAGATCGTCCTTCTGTCTGGAATGCCACATATTCCAGTTTCTTTCCCACTCAGGAAAGA GGAGAGAGAATCGTCCGTCATCCTTATCAAGGACTCCCGAACTGGGGGTGGCAAACGCAGGGTCAGGTCACTGCTACCCCAATGCCACAGTTCTGTACAG CAGCAGCAGCATCATCAGGATTCTCAATTTCAGCTACATCTCCACCAAAATCTATGAACCCATTTCCCCAGAGTCTTTGTTTTACTTCACCCAACAGTAA CACACCTGTTAGCATTGCACCTCAATACTATTATCAGGTGAAATCCCCGCAGGCACCACAATAGCCTTCCCATCTTTGTAAGGCAAAGCGTAAAAAAGTC TCTGTATTCAAAACTCATTGTATGATTCAGATACTAGTCGATGTATAAACATGAAATTTGATGGCACTTCATGGTTAAACCATTATGCACATGATGTGCG AACAAAACAAAACGCTACTTTTTTAGTCCAATAGTTTTCCAACAATTCTGTTTTCTTCTAAATTGTTTCTGGC BLAST |
Tissue | pods |
Gene name | LI_gene_180765; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_516812
Blastp | AP2-like ethylene-responsive transcription factor TOE2 from Arabidopsis with 37.85% of identity |
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Blastx | Ethylene-responsive transcription factor RAP2-7 from Arabidopsis with 44.62% of identity |
Eggnog | AP2(ENOG4110426) |
Kegg | Link to kegg annotations (AT5G60120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447915.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |