| Id Trinity | TRINITY_DN50901_c3_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_389199 |
| Sequence | AGAAACTAATATCTTTCAGGGTGTATATATGCCTCTCCCAACAAGTGTCGCTCACAGGAATTAAATCATCGGTGATCTTGGGATCCAGGTTTGAAAGGAC AATTTAAAGTGTTTGCTGTATTTGGAGAAGAGGATGAGAAGAAGAATGCATGGGGTGCACTCTTTCATGTAGAGGATCCTAGAACTAAAATCCAACTGCA TAACAAGGGAAAGATTGCTAATATAGATCAAGCCTTAGAAGTGGCAAGATATGATCTCCAGTACTTTGATTGGCGAGCTCGGCAAGATGTTCTTACCATC ATGCTCCTTCATGAAAAGGTGGTGGAAGTTCTTAATCCTCTAGCTCGCGAGTTTAAGTCCATTGGCACCATGAAGAAGGAGCTAGCAGAGTTGCAGGAAG AATTAGAAGAAGCACACAGACAGGTTAACATATCTGAGGCAAGGGTTTCTACTGCTTTAGATAAATTAGCTTACATGGAAGAGTTGGTAAATGATAGGCT GTTGCAAGACCGAACCGTAACTGAAGTTTCCCAGACATCCTCTTCTCCCAGCACTTCTTCTGACTCTGTAGATATTAAAAAGAGAAGATCGCCGAGGAGA AGGTTGCAAGTATCAGGTCCTGTTCAGCCATACCCTCCCCACTTGAAGAATTTCTGGTTTCCTGTAGCTTTCTCTTCTGGCTTGAAGGATGATACAATGA TCCCAATAGAATGTTTTGAGGAACCATGGGTTATCTTTAGAGGGAAAGATGGGAAGCCCGGTTGTGTCCAGAATACCTGTGCACACAGAGCATGTCCTCT GCACCTTGGTTCTGTAAATGATGGTCGTATTCAATGCCCCTACCATGGCTGGGAGTTTGCTACTGATGGAAAATGTGAGAAGATGCCGTCTACTCAACTG CGAAATGTGAAGATAAAGTCATTGCCATGTTTTGAAAAGGAAGGCATGATCTGGGTTTGGCCTGGCACTGACCCCCCAGCAGTTACACTTCCATCTTTGC AACCTCCTTCTGGATTTAAAGTCCATGCTGAGGCACATTATGCGAACCTGTCCCATTAGATATTGTGATTGATTAATCAAGGAATATGATTATATGGTTC ATAGAAAAATCTGTGTTCTCTTACATTTGTTGCTTTTTGCATGTGACAGATTGTCATGGAGATTCCAATTGAACATGGATTACTTTTGGACAACCTTCTG GATCTTGCGCATGCCCCTTTTACTCACACTTCCACTTTCGCTAAGGGGTGGAGTGTTCCCAGCTTGGTCAAATTCTTAACACCTGCAACCGGCCTACAAG GATACTGGGACCCGTATCCAATTGATATGGAGTTTCGGCCACCATGCATGGTTATATCAACCATTGGAATTTCAAAGCCCGGTAAACTGGAGGGGAAAAG CACTAAGCAGTGTGCCACACACCTTCACCAACTCCATGTCTGCTTACCATCTTCGAAACAAAAAACAAGATTGTTGTACAGAATGTCACTGGATTTTGCT CCTCTACTTACCCATATTCCTTTTATGCAACATCTGTGGAGGCATTTTGCAAAACAGGTTTTAGATGAGGATCTGCGGCTAGTCGAAGGGCAGCAAGAGC GAATGAACAACGGTGACAATGTGTGGAATTTCCCGGTACCATATGACAAGCTTGGTGTAAGGTACAGGTTATGGAGAGATGCATTGGAAAGAGAAGCTAA GGAATTACCCTTCAATAGAGAAAACTAAACATACAAAAGATTTAAGAATGTTTTTTTTATTTAAAACCAACATGGATTAGCTCAAGACCCACAATACAAG GACTAAGTTACAGATTGATTGGCTTTGCTTGCTTCTGTGGAAGCATTCAGGTAACAACTAAGTTTGATCATGATGCTATGCCCCTTGTAAAATAACAGCA AATATACACTCGGCTTTTACTGTTTATGTGTACAGGAACAAATCCATTTTTGTCTCCCATTTTATTAATGTTAATTGGCGGCTTAAACTCTTCATGTAAC ATATGCATTTGTTTTATTATCGATATTGTATTGGCCTATTATACTAGAAAACTGGCGAACTAGATCCCATATAATATGTCAATTATATTGGATATGCAAT TTGACCAGTAAGAACTTGTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_180878; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389199
| Blastp | Chlorophyllide a oxygenase, chloroplastic from Oryza sativa with 74.8% of identity |
|---|---|
| Blastx | Chlorophyllide a oxygenase, chloroplastic from Arabidopsis with 68.51% of identity |
| Eggnog | rieske 2fe-2S domain-containing protein(COG4638) |
| Kegg | Link to kegg annotations (4349433) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417731.1) |
| Pfam | Rieske [2Fe-2S] domain (PF00355.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |