Ll_transcript_389203

• Id Trinity: TRINITY_DN50901_c3_g2_i4
• Name Transcript: Ll_transcript_389203
• Sequence: CTCCGTCTAAAGAAATGAGAAAAAATTAAAATGTAATAATAGGATAAAGAAAGAGATCTGTCTGAATCGGAGTTGGCAAGGTGTGAGGGGCCCACTGTGG CAATCTTTCTCCTCTCCCATCTATGCATAACACGTCTGAAACAATAGGCACGTGGCCTCCCTCATAAGGCCAACGAGATCGCATGAAACAGCAACCATTA TCATCAACTAAATCCTCAAAACAACGTTGCCCACGTTTTCTTCTCTCTCTCTCTCTCTCATGACTGTCACTTTCTCAACGTCATGAACGCTATAGCAACT GGAGCACTTATCACTCTCCCATTTTCATCCTTCTCTAGATCATCCAACTTCGGTGTTAAAAAGGGTTTGAAAGGACAATTTAAAGTGTTTGCTGTATTTG GAGAAGAGGATGAGAAGAAGAATGCATGGGGTGCACTCTTTCATGTAGAGGATCCTAGAACTAAAATCCAACTGCATAACAAGGGAAAGATTGCTAATAT AGATCAAGCCTTAGAAGTGGCAAGATATGATCTCCAGTACTTTGATTGGCGAGCTCGGCAAGATGTTCTTACCATCATGCTCCTTCATGAAAAGGTGGTG GAAGTTCTTAATCCTCTAGCTCGCGAGTTTAAGTCCATTGGCACCATGAAGAAGGAGCTAGCAGAGTTGCAGGAAGAATTAGAAGAAGCACACAGACAGG TTAACATATCTGAGGCAAGGGTTTCTACTGCTTTAGATAAATTAGCTTACATGGAAGAGTTGGTAAATGATAGGCTGTTGCAAGACCGAACCGTAACTGA AGTTTCCCAGACATCCTCTTCTCCCAGCACTTCTTCTGACTCTGTAGATATTAAAAAGAGAAGATCGCCGAGGAGAAGGTTGCAAGTATCAGGTCCTGTT CAGCCATACCCTCCCCACTTGAAGAATTTCTGGTTTCCTGTAGCTTTCTCTTCTGGCTTGAAGGATGATACAATGATCCCAATAGAATGTTTTGAGGAAC CATGGGTTATCTTTAGAGGGAAAGATGGGAAGCCCGGTTGTGTCCAGAATACCTGTGCACACAGAGCATGTCCTCTGCACCTTGGTTCTGTAAATGATGG TCGTATTCAATGCCCCTACCATGGCTGGGAGTTTGCTACTGATGGAAAATGTGAGAAGATGCCGTCTACTCAACTGCGAAATGTGAAGATAAAGTCATTG CCATGTTTTGAAAAGGAAGGCATGATCTGGGTTTGGCCTGGCACTGACCCCCCAGCAGTTACACTTCCATCTTTGCAACCTCCTTCTGGATTTAAAGTCC ATGCTGAGGCACATTATGCGAACCTGTCCCATTAGATATTGTGATTGATTAATCAAGGAATATGATTATATGGTTCATAGAAAAATCTGTGTTCTCTTAC ATTTGTTGCTTTTTGCATGTGACAGATTGTCATGGAGATTCCAATTGAACATGGATTACTTTTGGACAACCTTCTGGATCTTGCGCATGCCCCTTTTACT CACACTTCCACTTTCGCTAAGGGGTGGAGTGTTCCCAGCTTGGTCAAATTCTTAACACCTGCAACCGGCCTACAAGGATACTGGGACCCGTATCCAATTG ATATGGAGTTTCGGCCACCATGCATGGTTATATCAACCATTGGAATTTCAAAGCCCGGTAAACTGGAGGGGAAAAGCACTAAGCAGTGTGCCACACACCT TCACCAACTCCATGTCTGCTTACCATCTTCGAAACAAAAAACAAGATTGTTGTACAGAATGTCACTGGATTTTGCTCCTCTACTTACCCATATTCCTTTT ATGCAACATCTGTGGAGGCATTTTGCAAAACAGGTTTTAGATGAGGATCTGCGGCTAGTCGAAGGGCAGCAAGAGCGAATGAACAACGGTGACAATGTGT GGAATTTCCCGGTACCATATGACAAGCTTGGTGTAAGGTACAGGTTATGGAGAGATGCATTGGAAAGAGAAGCTAAGGAATTACCCTTCAATAGAGAAAA CTAAACATACAAAAGATTTAAGAATGTTTTTTTTATTTAAAACCAACATGGATTAGCTCAAGACCCACAATACAAGGACTAAGTTACAGATTGATTGGCT TTGCTTGCTTCTGTGGAAGCATTCAGGAACAAATCCATTTTTGTCTCCCA
• Tissue: pods
• Gene name: LI_gene_180878;
• Additional information: details;

Expression of Ll_transcript_389203

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0
• PS2: 0.1
• PS3: 1.1
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389203

• Blastp: Chlorophyllide a oxygenase, chloroplastic from Arabidopsis with 68.01% of identity
• Blastx: Chlorophyllide a oxygenase, chloroplastic from Arabidopsis with 68.36% of identity
• Eggnog: rieske 2fe-2S domain-containing protein(COG4638)
• Kegg: Link to kegg annotations (AT1G44446)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417731.1)
• Pfam: Rieske [2Fe-2S] domain (PF00355.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;