| Id Trinity | TRINITY_DN50903_c0_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_386764 |
| Sequence | CCCCCACTAGTGGATCGGTTTGGTGTGGGTATTCCTATTGGACCTGGACCCTTGGGCCTAAGGCCAGGATTTTTTCCTGAAGAAAATTCTCCGAAAAGAG GCACAGGTTTGTCATGTTTAGCTTATGTATAGTTTGGATGAAATGGATGTTTCTTGGCCAAGTTTTTTCACCCTGACTCTTACTTTCCTTAAAGATACAA CTCGTGACGATGACTGGAAGTGTCCAAAATGTGGCAATATCAACTTCTCATTCAGAAATGTTTGCAACATGAGAAAGTGCAACACCCCAAAGCCTGTATC CCAGGTCTCAAAATCTGACAAACATTCCAAGCAAAACATGCCTGAGGGATGCTGGAAGTGTGAAAAATGTAATAATGTAAACTATCCATTCAGAACCAAG TGCAACAGACAGAATTGTGGTGCAGAAAAGCCAGCTGAGTCAAGTCAATCTCCATCACCAGCTTCAGATCAAAATGATCAGTGAGTACTAGGACATGTTT GAGGATTGAGAAGGTCCAGATTTGTCATCCAGCATTTCCCAATTTGTGTGTCTCACTTTCAGTTTTATCATCCTCTATGTTGCAGCAGTTGTCAAGTCAC TGGCTTTTTCACTATCTGTGTCAAGTGTTGTAGTAACTGAGATGGTATTGGTCTCTTTAACATTTGTATGCCATCTTACCCTGGCAAAGATTCTACATGC TGAATCTTGTATTTAATAGATAGGTTCCTTTACTCTCAGATTCAAGTCATTGCTTTAGTTGTTATGCTATCATATACCTTTTAGTTGTGGCAGGAAGGTT ATTTCAGGTTCTTTAGTTTTCTTTTGGTTTTCAATGGAAGTATAGATGAGTTGACTTTGAATAAAACATAGGAATTAGGTTTTTCTTTATAGCAAGAACA TGGTTAGGGCAGCCTGTCACATAAACCTATAGGTCCTCCTCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180885; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_386764
| Blastp | RanBP2-type zinc finger protein At1g67325 from Arabidopsis with 64.55% of identity |
|---|---|
| Blastx | RanBP2-type zinc finger protein At1g67325 from Arabidopsis with 75.71% of identity |
| Eggnog | Zinc finger, RAN-binding domain containing 2(ENOG4111QXA) |
| Kegg | Link to kegg annotations (AT1G67325) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464619.1) |
| Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |