Ll_transcript_386227

• Id Trinity: TRINITY_DN50905_c0_g1_i4
• Name Transcript: Ll_transcript_386227
• Sequence: CTGCATCCTATTTTTATAAACAAAATTTTGTAATTCCCATGCAATGCTTTGGTTCTACACACACTCATTTCATCACCAACCCAAAGCAACTATGTTTCAT CTCTTCCTCCTTCTCCTCCTCTTTCTCTCTCCTCCACACCCCTCTCTCTCTCTAACCCAAGATGGTCTCCTCCTCCTCCACTTCTCCAACCTCCACCTCC CTGACTGGAACCCCCTTGCCTCCACCCCATGCAACTGGACCGCCGTCACCTGCCACCCCTCCACCTCCGCCGTCACTGCCCTCAACCTCTCCAACCTCCA TCTCTCCGGCCCTTTCCCAACCTCCATCTGCCTCCTCCCTGCTCTCTCCTCCCTCTCTCTCTCCTTCAACAACCTCAACTCTTCTATCCCCTCCTCCGCC TTCTCTTCCGCCTGCGCCCGCCTCCGCCACCTCGACCTCTCACAAAATATCCTCACCGGACCAATCCCCCATACCCTGTCATCACTCCCCAATCTCATAT ACCTCGACCTCTCATTCAACAACTTCTCCGGCGAAATTCCGGCGAGATTTTCCTATTTCCGGCGACTGGAATCTCTTATTCTTGTTAATAACTTCCTCAA CGGTACCATACCCTTTTCTATTGGCAATGTTTCCACCTTGAAAACGCTTGACTTAGCTTATAACCGTTTCCTCACTGGTCCAATACCAAACTCATTAGGG AACCTAACGAACCTTGAGGGTCTATGGTTAGCAGGGTGCAACCTCGTGGGTTCGATTCCAAGCTCATTGGGTAACCTTACTCGTCTTCAAAATCTTGACT TGTCGAGGAATATGCTCGTCGGAGCTATACCGGAGACTCTGTTCTTGGGGTTGAAGAGCATTATGCAAATTGAACTCTACGAGAATTTTCTCTCCGGTGA GTTACCGGAAATGATGAACGTTACCGAGTTGGAACGGTTCGATGCTTCCGTGAATGATTTGAGTGGAAAAATTCCTAGTGAGTTGTGTAAATTGAAGAAA CTCGAGTCTCTGAATTTGTATGATAATAAACTTCATGGGTCTTTGCCAGAATGCGTAGCAGGGTTTGATAAATTGTATGAGCTGAAATTGTTCAACAACA CGCTCAATGGAACATTGCCAAGTGATTTGGGGAACAATTCAATGTTTCAGACTTTGGATGTCTCATATAATAACTTTTCCGGCGAGATTCCGGCGAATTT GTGCGGCGGAGGAACGTTGCAAGAGTTGATGATGATTTACAATTCTTTTTCAGGGAGAATCCCTGAGAGTCTTGGGAATTGTAAGAGCTTAATACGTGTT AGGCTCAGGAACAATAATCTCTCTGGAACTGTTCCTGATGCACTATGGGGTCTACCCCATTTGTATTTGCTTGAACTTGTTGAGAATTCTCTTTCTGGGT CAATTTCTAATGCAATTTCTGGTGCTAAGAATCTGTCAATTTTGTTATTGTCGAGGAACATGTTTTCTGGGTCGATTCCTGATTCAATTGGGTTGTTGGA GAGTCTTGTCGAGTTTGTTGCCAGTCATAATAGTCTTACCGGTTCGATTTCGATTAGTTTGGTGAAATTGAGCCAGTTGGATAGGCTTGTTCTTAGTGAT AATGAACTTTCTGGAGAAATTCCAGTGGGAATTGGTGAATGGAGGAAGCTCAATGAGCTTGATTTGGCAAATAATAAGTTTGATGGCAATATTCCTAATG AATTAGGAAACTTGCCTGTACTTAATTATCTTGATCTTTCTGGGAATCACTTTTCTGGTGAAATTCCATTTGAGCTGCAAAATTTGAAGCTTGATTTGCT CAATTTGTCAAACAATCAGCTTTCTGGGGATATCCCTCCACTTTATGCCAATGAGAATTACAGGAAGAGTTTTCTAGGAAATGAAGGCCTCTGTGGTGAT CTCTCAGGACTTTGTCCGAGGCCAACCTTGGGCGAAAATAAGAACACAAAGTTTGTGTGGCTCTTGAGGTTCATATTTGTACTTGCTGGGATTGTGTTTG TTGTTGGGGTGGCTTGGTTTTACTTCAAATTCAAGAACTTCAAGAAGATGAAAAAGAGGTTTAACATGTCAAAGTGGAGGTCATTTCATAAGCATGAGTT CAGCGAGTTCGAGATTGTGAAATTGTTGAGTGAAGATAATGTAGTAGGAAGTGGAGCATCTGGTAAGGTCTACAAAGTAGTGCTAAGTAACGGTGAGGTC GTAGCAGTGAAGAAACTGTGGGCAGTGAATAAGATAGAGACCGAAAGTGTTGATTCAGAAAAGGATGGCTTTGAAGCTGAAGTTGAAACATTGGGAAACA TTAGGCACAAGAATATTGTAAGGCTCTGGTGTTGCTGCAAAAGTGGGGATAATAATAATAAGCTCCTAGTTTATGAATACATGTCAAATGGGAGCCTGGG AGATTTTTTGCACAGTAGCAAGAAATGCTTGTTGGATTGGCCAACTAGATATAAAATTGCTATTGATGCTGCTGAAGGACTTTCTTATTTGCATCATGAT TGTGTCCCTCCTATAGTTCATAGGGATGTAAAATCTAACAATATATTGTTAGATAGTGAATTTGGAGCAAAAGTTGCTGATTTTGGAGTAGCCAAATTTT TTAGGGGAGTCAGCCAAGGGGCCGAATCCATGTCTGCAATCGCCGGTTCTTGTGGTTACATTGCACCAGAATACGCCTATACTCTTCGAGTGAACGAAAA GAGTGATATTTATAGCTTCGGCGTGGTCATTTTGGAATTGGTTACTGGGAAACCTGCTCTTGATCCAGAGAATGAGGACCAAAATCTGGTAAATTGGGTT ACCTCCACATTGGATCAGAAAGGAGAGGATCAAGCGATTGATCAAACTCTCGATTTTAAGCACAGAGAAGAAATAAGCAAGGTACTCGGCGTGGGGCTTA TTTGTACTAGCTCGCTTCCTATAACCCGGCCTTCGATGCGTAGAGTGGTGAAAATGCTGCAGGAAATAACTTCAGTTCCTAAATCCAGAAGTGGAAGATT TTCTCCATACTATCAAGAAGAGGCCTCTGAAAATGATCATCAAGGAAACATAGTATAAGCTAGGTGCTTAAAAATAAGGTTGAGCTTCTATTTACACAAT AACTTTGGTATTTACAAACTCATATCTTTCGATGTTACCAATTTGGTCCCTCAAATATTGAAAACCCAAAATAGTTCCCAAATTTTTTAAATGATGGTCA AATTAGTCATTTTTAACATATTTTATAATACTCGGTAAAAACTAGTTTAACCTTAAAATTGACTAATTTAACCCACATAAAATTTTGAGACAATTTTGGT TTTTTTCAATTTTTTAGGGACTAAATTGATAAAATCGTAAAATATAAGCTACTTAAATAAGTATTTACCCAAGAACTTACACCTCGTGTAGGTATTACTA CTACTATTTGAATAAGCCATTGTAACACATGATAAGAGAGACTTTCCTTTTTCAATCATGCAATTGTATCATTTGTGTCAACTATAGAAATGGTATAATC AATATTACAATAGACTATCAACTCAGTCTTAAATTATAA
• Tissue: pods
• Gene name: LI_gene_180898;
• Additional information: details;

Expression of Ll_transcript_386227

FPKM

• PAB: 5.3
• PNAB: 1.6
• PS1: 2.8
• PS2: 0.4
• PS3: 0.8
• PW1: 7.1
• PW2: 3.5
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386227

• Blastp: Receptor-like protein kinase HSL1 from Arabidopsis with 57.29% of identity
• Blastx: Receptor-like protein kinase HSL1 from Arabidopsis with 56.97% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT1G28440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432131.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;