Ll_transcript_386783

• Id Trinity: TRINITY_DN50907_c1_g4_i2
• Name Transcript: Ll_transcript_386783
• Sequence: CAAAAAAAAAGAGTCAATGATGAGTTACTAAACAAAACTCAAGCCTCTGAGCTAGATATCAAGATAGAATAACAATAATATATTATTTCTTCAAAACCCC TCTTTTTGTTCTCCTTCATCCTTAATCCCTATCATTCACAACTCACCCTTCAACTCGTTTTCTCCGAGATTCAACGTCTTTTCCTCTTCTTCCTTCTAAT AACTTTCACTCACAAAATGAGTGTTCCTAATACCACTCCGGCTATGATGTTCACGGCGGCTCAACCACTTTTCACGGTGGCTCAGTGGCAGGAGCTGGAG CACCAAGCCCTTATCTTCAAGTACTTGAAAGCTGGTCTCACTGTTCCACCAGACCTCCTCGTACCCATTCAGAAGAGCTTACAATCGATTATGGCTCATA AAAATTACCCATCTTTGGGTTATTATGGAAATGGAAAGAAGATAGACCCAGAACCTGGAAGATGCAGAAGAACTGATGGGAAAAAATGGAGGTGTTCAAA GGATGCACATCCTGATTCTAAATACTGTGACCGCCACATGATACGACGTCGTTGCCGTTCAAGAAAGCTAGTGGAATCTCAATCACAATCTTCTTCTTCT TCTGTTGCTACTACTGGGACCACAACAACTACTACTGTTTCTGCTGCATCTGGAACTGGAACCGGAACCGGAACCTTCCAGAATCTTCCATTGCAAACTA GTGGTACCCGTCAAGGTTTCACTATTGGGAATATTGGGAATGGGAACAACAACAGCACCTTGAATATGATGGAGCCTTTGCCTCTTCCTACTGAGGATTC CAGGAAAGAGTTAAGGTATATCTATGATCTTTGCTGTTTATGTTTGATGTTGTTATCTTCACTGTAAATTGATTGAGATATTGGTGAGATTGTTTTGAAT TTGGCAACAATTTTAACCAATAGAAATAACTCCATAATTTCCTGATATATTAAATACAAGTTTTCCCAAGTACAAAGTTATATTTAAGTCTTGTATGAAT GGATGTTTTCGTTATCGTTAACTCGTAGTATTTTGTTGCTTGGGGTTTTCTAATGATCAAAAGCAATTGTTGAAAAAAGTTAAATTTGTAATAATTAATT GAAAAGTAAAGGATCTAATAATGGAGAAGGTGGTTTGTAAAGGATCTAATATAGGAACTAAAGTAACTTGAATTTAACCCTTCCTATTTTGTTTTTCTTA ATGTGTTCAAAACTGTTAGAGTTTTGGGTCCAGTAATGATTGTCAAACTCATAATTTCTAATGGGGTTTTTTCTTTTTTTGGAGGAGGGATCCACAAACA ATGTTATGTTATATATGGTATAGTTGTGACTCTAACTTCTAAGTTACCTAACATGTGGGTCAGTATGATGTGTGGGATGAAAGTAAGGTGTAAGTCATCT ATTCACAGTTCTCGAGTTAGACTTACTTGATTCGTGTCTTTAAAAGATGCAGTACTAATAAGCAATGATCTCGAAAAGTTCAACCTAGCATTGTTGCCAA ATTTTCAGCCTGTGAAAAGCTTAATTTAATACAATTTCAACATTGCCCTTTATGGACAGCAATCAAGTTCATCATGCATTTCTTGTTTTCTAGATTGCAT TTAATTTGGTGTTGCATATTGTGGAAAACTTAATAAACTCTTGATTTTGTTGTACCTGAATTGTTCTCATATCATTCATTGTTATCATAAGTTGGTACTC CGTTCTACTTATTCAAATATTTTGTAGACGTACTTTACATAACTAAAACATAGTGGAATGTTAACAAGTGCTGTAAGGGCTTCTTTAAGGATGCAAGTAA AAGAATTTTGCATTGGAAAATGATGTGTTTAATAATTCGTGAAGTCTTGAAGTCGGTTTTCCAACATTAACTTACATATCTTATATTCCTTAAACAATGC CCACGGGCACTTGTTAACACAACCCTAAAACATATTGTAAGAAGTGTGAGGCATGGTATGACCTTGTGACAAGGTTAATTAAGTATCACGGAATGGTTTG ATAAAAACTGGAAATGAAGGGATATTTAGTCATACTGCATATTAATATCAGTCTAAACTCTAAACCAAGAACTTAGCAGGAGAACTGATGTTAATGTATG ATCCCATTAAAACAATTAAGGAGAGGTATCAGTGAACTGTCGGAAAGGTGTTGAAGAAATTGCGAAATATAGCCTGTTTTTTGTAATTGTCCAGTGATAC GATTTTCCAAAATTTGGCTATCAGTGAACTGTCGTAAAATCTTTCAATTATTTCTTTTGATGTCTTTCTTCATCTTGTTATTCTCATTTTTGTTTTTCTT CTATAGTACTTTCAGATTGAACAGGCTGAACATTTCTTTTGTAGCCTTGTTACAGTTTGCTTTCCACCGGAGAAATCCTAATTGATTTTCCTCCATAGGT TTTATATGTGCAGATGGTGGGTGCTTTTGTAGTACATGCTTGCAGTGACCCTCAGCCTCTAAGCATTTGGGTCCATTTGCAGCTTTTCATAATATTTTCT TCAATACTTTTGATTTTTCTGCTAACTTCATATCATGCATAATTGACATAAACTTAACATCTCGACTTCT
• Tissue: pods
• Gene name: LI_gene_180906;
• Additional information: details;

Expression of Ll_transcript_386783

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0
• PS2: 0.1
• PS3: 0.2
• PW1: 0.3
• PW2: 0.9
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386783

• Blastp: Growth-regulating factor 4 from Oryza sativa with 64.17% of identity
• Blastx: Growth-regulating factor 4 from Oryza sativa with 68.27% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (4330436)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422355.1)
• Pfam: QLQ (PF08880.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;