| Id Trinity | TRINITY_DN50907_c1_g4_i5 |
|---|---|
| Name Transcript | Ll_transcript_386786 |
| Sequence | CAAAAAAAAAGAGTCAATGATGAGTTACTAAACAAAACTCAAGCCTCTGAGCTAGATATCAAGATAGAATAACAATAATATATTATTTCTTCAAAACCCC TCTTTTTGTTCTCCTTCATCCTTAATCCCTATCATTCACAACTCACCCTTCAACTCGTTTTCTCCGAGGTAACCGCCCACAACAACGTTTTCTTTTCTCT CTTTCTTTGTCTCTATATTACACCCTTCTCTCTCTTTTTTCTAATGCATATTTTACTCTCAGATTCAACGTCTTTTCCTCTTCTTCCTTCTAATAACTTT CACTCACAAAATGAGTGTTCCTAATACCACTCCGGCTATGATGTTCACGGCGGCTCAACCACTTTTCACGGTGGCTCAGTGGCAGGAGCTGGAGCACCAA GCCCTTATCTTCAAGTACTTGAAAGCTGGTCTCACTGTTCCACCAGACCTCCTCGTACCCATTCAGAAGAGCTTACAATCGATTATGGCTCATAAAAATT ACCCATCTTTGGGTTATTATGGAAATGGAAAGAAGATAGACCCAGAACCTGGAAGATGCAGAAGAACTGATGGGAAAAAATGGAGGTGTTCAAAGGATGC ACATCCTGATTCTAAATACTGTGACCGCCACATGATACGACGTCGTTGCCGTTCAAGAAAGCTAGTGGAATCTCAATCACAATCTTCTTCTTCTTCTGTT GCTACTACTGGGACCACAACAACTACTACTGTTTCTGCTGCATCTGGAACTGGAACCGGAACCGGAACCTTCCAGAATCTTCCATTGCAAACTAGTGGTA CCCGTCAAGGTTTCACTATTGGGAATATTGGGAATGGGAACAACAACAGCACCTTGAATATGATGGAGCCTTTGCCTCTTCCTACTGAGGATTCCAGGAA AGAGTTAAGGTATATCTATGATCTTTGCTGTTTATGTTTGATGTTGTTATCTTCACTGTAAATTGATTGAGATATTGGTGAGATTGTTTTGAATTTGGCA ACAATTTTAACCAATAGAAATAACTCCATAATTTCCTGATATATTAAATACAAGTTTTCCCAAGTACAAAGTTATATTTAAGTCTTGTATGAATGGATGT TTTCGTTATCGTTAACTCGTAGTATTTTGTTGCTTGGGGTTTTCTAATGATCAAAAGCAATTGTTGAAAAAAGTTAAATTTGTAATAATTAATTGAAAAG TAAAGGATCTAATAATGGAGAAGGTGGTTTGTAAAGGATCTAATATAGGAACTAAAGTAACTTGAATTTAACCCTTCCTATTTTGTTTTTCTTAATGTGT TCAAAACTGTTAGAGTTTTGGGTCCAGTAATGATTGTCAAACTCATAATTTCTAATGGGGTTTTTTCTTTTTTTGGAGGAGGGATCCACAAACAATGTTA TGTTATATATGGTATAGTTGTGACTCTAACTTCTAAGTTACCTAACATGTGGGTCAGTATGATGTGTGGGATGAAAGTAAGGTGTAAGTCATCTATTCAC AGTTCTCGAGTTAGACTTACTTGATTCGTGTCTTTAAAAGATGCAGTACTAATAAGCAATGATCTCGAAAAGTTCAACCTAGCATTGTTGCCAAATTTTC AGCCTGTGAAAAGCTTAATTTAATACAATTTCAACATTGCCCTTTATGGACAGCAATCAAGTTCATCATGCATTTCTTGTTTTCTAGATTGCATTTAATT TGGTGTTGCATATTGTGGAAAACTTAATAAACTCTTGATTTTGTTGTACCTGAATTGTTCTCATATCATTCATTGTTATCATAAGTTGGTACTCCGTTCT ACTTATTCAAATATTTTGTAGACGTACTTTACATAACTAAAACATAGTGGAATGTTAACAAGTGCTGTAAGGGCTTCTTTAAGGATGCAAGTAAAAGAAT TTTGCATTGGAAAATGATGTGTTTAATAATTCGTGAAGTCTTGAAGTCGGTTTTCCAACATTAACTTACATATCTTATATTCCTTAAACAATGCCCACGG GCACTTGTTAACACAACCCTAAAACATATTGTAAGAAGTGTGAGGCATGGTATGACCTTGTGACAAGGTTAATTAAGTATCACGGAATGGTTTGATAAAA ACTGGAAATGAAGGGATATTTAGTCATACTGCATATTAATATCAGTCTAAACTCTAAACCAAGAACTTAGCAGGAGAACTGATGTTAATGTATGATCCCA TTAAAACAATTAAGGAGAGGTATCAGTGAACTGTCGGAAAGGTGTTGAAGAAATTGCGAAATATAGCCTGTTTTTTGTAATTGTCCAGTGATACGATTTT CCAAAATTTGGCTATCAGTGAACTGTCGTAAAATCTTTCAATTATTTCTTTTGATGTCTTTCTTCATCTTGTTATTCTCATTTTTGTTTTTCTTCTATAG TACTTTCAGATTGAACAGGCTGAACATTTCTTTTGTAGCCTTGTTACAGTTTGCTTTCCACCGGAGAAATCCTAATTGATTTTCCTCCATAGGTTTTATA TGTGCAGATGGTGGGTGCTTTTGTAGTACATGCTTGCAGTGACCCTCAGCCTCTAAGCATTTGGGTCCATTTGCAGCTTTTCATAATATTTTCTTCAATA CTTTTGATTTTTCTGCTAACTTCATATCATGCATAATTGACATAAACTTAACATCTCGACTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_180906; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_386786
| Blastp | Growth-regulating factor 4 from Oryza sativa with 64.17% of identity |
|---|---|
| Blastx | Growth-regulating factor 4 from Oryza sativa with 68.27% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4330436) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422355.1) |
| Pfam | QLQ (PF08880.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |