Ll_transcript_386402

Id TrinityTRINITY_DN50911_c0_g1_i11
Name TranscriptLl_transcript_386402
SequenceTTCACGATCCGAAAATTTCTAAACACTGAAAACTTACAACCATCAAAATCTAATTTCACCACAATTTGGAATATTATTATATCTCTTTTAAGATTTTACG TTTGATTCTTCACAATCTTATCTCTGATTCTTTACCTTTTCTTATTTGGTTTTATCTTACCTGCAAAGTTTTAATCTTTGTCTCTTTTTGTTAATTTACC ATCTGGGTAAGTGAATTTGCGAGTGTTTTCTTCTTAAATGCTCAAAAGGGTGTTCTGGTTTTGATTGAACAAGCAAACATAGCAAAAGGGTTACCCCTAA ACATTTTAACGCTACCAGATGTCAGAAAATAGACACCCTCTCACGAATGCTGTTTCTAATCACTCTGGTGATAACATTGAAGAAGCCGTTCTACGTTTGA ATATCAATGATAACCAGGATAGAGATGCTGCTGCTCAATCAATTCCATTTCCAGAACGACCCGGTGAACCTGACTGCTTATATTATCTGAGGACTGGAAT GTGTGGTTATGGGAGTGCCTGCCGCTATAACCACCCTGCAAATGTTTCACTGGGTATTCATTATGGTGAAGAACTCCCTGAGAGAGTTGGGCAACCTGAT TGTGAGTATTTTCTAAAGACAGGGACGTGCAAGTACGGTTCGACATGTAAATATCACCATCCAAGGGACAGGCGAGGTGCTGCTCCTGTATCATTCAATT CGTTAGGCCTTCCCATGCGTCAGGTTTGTCCTTCCTATTGCAGCTGCTGCTCTATTTTTTCCAAACTGGTTATTATTACTGTGCTTAATTGCTTATGAAA GATATGATTGTGGTTGCATTTTCCCTCCAACATTCTTTGGTTGTTGCTTTTAGGAAGAAAGGTCATGTCCCTATTACATGAGAACCGGGTCTTGTAAGTT TGGAGTAGCATGCAAGTTTCATCATCCTCAGATTGGAGCTTCCCCTGTGGCTGGATCTCCGACCTCAACTATTCTTCCGACATCTGGTTTACCATATGTT GGTGGGTTTTCTGCATGGCAAATACCAAGAATGTCATATTTATCTGGGCAGGGTATTCAATCTTATGTACCTCCTTTTCTGTCTTCTCCACAAGGCATGA TACCTGCACAGAACTGGAATACCTACATGGTCAGTTAAGGCTGTTGAATTTCCTATTTAGTATATGTATTTGCGGTATGCTCTAGTCTTTATTATTTTAT TCCATACAGTGCTATCCTATCATTGATTGTGATGCTGACTGGTATGATTTCTCACAATGAAAGATCACATACATGCAAGTTTTGGATAAGTGTATGTAGC ATTAGCTGTTATCTACTTACTTGGAAGAACAGTGAGTTTGTCTGATATATCTAGATTAGGAAATCTTGCTACCATCTTTTACTATCAGATTTCATAGACA TTGCAAGATACTTTATACAGAAAGTGATTTGTGCATGACATTTATGTTATTCCTTAAGCTCCTCATTTTATTTGTTTATTGATTTCCAAGTGCATTTGAC ATTCATACACATTTTAATATCTGAAGCAGAATGTGCATTGTTCCTTAGGTAAGCTCTTCATAGCATGCATCTTCAGTGATAAATTGATAATTAATTATGT TCAATTTTGGTTATTAGATACTGTCAAGTGTCAATGGTACAATAATGCAACTTAGATTGACATTTTTTTTGTTTTGACTTTGATTTTCTTACTCATATTA GGGGAGTATGAGCGGGGCAATAACTACCGGTTTTCTTGGATCTAATTTTGCACCAGTTCTTGGTGGTCAGTTAATAAGTCCAACTCTCCCGGAGAGACCT GGTCAGCCAGAATGTAAATACTTTATGAGCACTGGTACCTGCAAATATGGATCTGATTGCAAGTACCACCACCCAAAAGAAAGAATTAATCAATCATTGA TGAATCCACTTGGTCTTCCTGTCAGACCTGGACATGCTATATGTTCTTATTATAGACTCTCTGGAATATGCAAGTTTGGCCCAACATGCAAATTTGATCA TCCAATTTTGGCAATTCCTCAGAGCTATGGCTTGACCTCCTCACATGCTTTCTCTGTACCCGATACATCTCTGATTAACGGTCGAAAAGTTTTATCAACT GTCCAACCACCCGATACATCTATATCTAAATTATCAAATGACAAGGTTCATCACTCTGATACAAAAGCTACCGAAAATTCATCCGAACAAGCTGATTCTA CTACACTAGATTCCTTAGCAGCCACCTCGGAGTCGTAATTTAGATGACTAAACTGCTTCCAAGTTTGTTATTTTTTGGGGACATTTTTCCATATTTTAAG GACAGACAGCATATCATACATACCTCCTGTTCCCCCTTTTCACCTGCAATTCTGTGGAGTTGGATAGTTTGATAAGAGGTTGTTGTGACAAACACTTGCT TGTGGGGATATGAGGCATTTTTTTGTGGTGAATAAGATGCAGGTTGAAAGTTTGTGACTTTTACTTCTTTTTTCTTTTCCTTTCTGTTGGGGTCAATTTG GTGCATACTTAAAATGGAAGTACAAAACTCAGGAATCTAGGAAAACTCAACTGAAGTTTTTATCCCATTTTTAAGGGGTACCAAATTCATTATTGATATT TTTTTTTCCTTCTTTAGGGATCCATAAATTTTCATTTTATGTGACATGTTCTTGAAATTATGAGAAATAACTGGATTCTTATATACTTGTTTCTTTTGCT AGAGAAATAATGCCCAATTGAACATAGGAGAGTTTTCTTTTTTAGTTTGGTAACCACTATTGTTGGGAGTCATAATGTGGTCTGATATTGAAGATGGTGG TCTTATGGACCGGAGTGAAGGAGGTTATGGGTTCGAGTCTCACCATCAACAAAAAGTTTTGATGGCTAGAAAAGACTCAGGTTTGATTCTTTTGTTGCAC CACGTTGAATAGAAGCACGTGTTCTCAAGCTATACACGTTGGATAAGGAT BLAST
Tissuepods
Gene nameLI_gene_180932; 
Additional informationdetails; 

Expression of Ll_transcript_386402

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_386402
BlastpZinc finger CCCH domain-containing protein 63 from Oryza sativa with 43.97% of identity
BlastxZinc finger CCCH domain-containing protein 3 from Arabidopsis with 55.78% of identity
Eggnogzinc finger CCCH domain-containing protein(ENOG410ZQFM)
KeggLink to kegg annotations (4350492)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019455851.1)
PfamZinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;