Ll_transcript_386412

• Id Trinity: TRINITY_DN50911_c0_g1_i20
• Name Transcript: Ll_transcript_386412
• Sequence: CTTTTCTCTCTCCTTTCCCCTTTTCTTTTTTAAGCTACTTATTTGGTTTTATATTTATTCTACCTGCAAAGTTTTAATCTTTGCCTCTTTTGGACAATTT CACTGATCATTTTAACCATCTGGGTGGGTGAATTTATGAGTGTTCTGTGTTGATTTCTCCTTAAAGGCTCAAAGGGGTGTTTTGGTTTTGATTGAACAAG CAAAGAAATCAAAAGGGTCCTTTAACATTTCAACGCTACCAGATGCCAGAAAACATACACCCTCTCAGGAATTCTGCTTCTAATCACTCCGGTGATAACA TTGAAGAAGCCATTCAGCGTTTGAAAATCAATGATAATCGGGACAGAGATGGTGCAGCTCAATCTTCCCCATTCCCGGAACGACCTGGTGAACCTGACTG CTTATATTATTTGAGGACTGGAATGTGTGGTTATGGGAGTAACTGCCGCTACAATCACCCGACTAATGTTTTACCGGGTACTCATTATGGTGAAGAACTT CCTGAGAGAATTGGGCAACCTGATTGTGAGGTGTGAATCTTTTCGTAATTAAAATGCATCTGTTTCTCTATGCCTTTCTTATGTTGAATGTTGCTCCATG ATGTGAATGCTGTTCCCCATGCTTCCTTTCTAAAATTTGATCTGGTCTATTATTAAAAATTGTAGCCATAGTGATTACCAGTGTGTTATTAGCAAATTAA TACATGAAGAATTAAATGAGCTAGGTATCTCATGAGATGGACGGAAAGTTAATGTTTATGCTGTGCACAGTAAAAGAGGAAATAGATAATTGGGTTTTAG TTTCATGTCTGTTATTCTAGAAATCTCGATTTCAGGAGCTGGAGTATAATCTGAAAATGTTCATAATTTGTTTATGGAAGATATTATATAGTCCATTATT GTGATCGATTTCATTGCAATTCCAATGCATAAATACATTTTGGGGTTATACGACCCACACAAGTGGTAATTTAATATCTGGTTTGGAGTACACATTGCAG TATTTTCTTAAGACAGGGACATGCAAATATGGCTCAACATGTAAATATCATCATCCAAGGTATAGGCAAGGTGCTGCTCCTGTATCATTCAATTCTCTAG GCCTTCCTGTCCGTCAGGAAGAAAAACCATGTCCATATTACATGAGAACTGGGTCTTGTAAGTTCGGAGTCGCATGCAAGTTTCATCATCCACAGATTGG AGCTTCCCTTGTGACTGGATCTCCTACCTCAACAATCCTTCCCACATCGGGCTTACCATATGTTGGTGGTATTTCTGCATGGCAATTACCAAGAATGTCA TATTTATCTGGGCAGGGCATTCAATCTTATGTGCCACCTTTTCTGTCTTCTCCACAAGGCATTATACCTGCACAGAACTGGAACACCTACATGGGAAGTA TGAGCTCTGCAATGCCTACCACTTTTCTTGGATCTAATTTTGTCTATGACACCATGAATCTGGGTGAATCGCTTCTTGGTGGTCAGGTAATAAGTCCAAC TCTCCCTGAGAGACCTGATCAACCAGAATGTAGATACTTTATGAGCACTGGTACCTGCAAATATGGATCTGATTGCAAGTATCATCATCCAAAAGAAAGA ATCGCTCAATCATTGATGAATCCACTTGGTCTTCCTGTCAGACCTGTAAGTTCAGTTTGTAGTTGATGCTTACTTGCAATGCGAACGATTTTATTCATAT TATGATCACTAATATGTTACCAAGATATTAGCATTTTCCATATTGGCTATAATAAGGCTATGGTTACTTTGATTCCAATCTTGGTTATTTGCAGGGGCAT GCTATATGTTCATACTATAGACTCTACGGAATATGCAAGTTTGGTCCAACATGCAAATTTGATCATCCAGTTTTGGCAATTCCTCAGAACTACGGCTTAA CCTCACCCGCTTTTCCTGTTCTTGACACATCTCTGATTAGTAATCCAATAGGTTTTTCAACTGTCCAACCATCCGAGACATCTCCATCCAATGACAAGGT TCAACACTCTCATACAAAAGCTACTGAAGATTCATCCAAACAAGCTGATACTACTACACCAGATTCCTTCCCAACCACCTCACAGTCTTAATTTACATGA CCTGCTCCAAGTTTGATATTTTTTGGGGGCACTTTTCCATATTTGAAGAACAAACATATCATACATACCTCCTGTTCCCCCTTTTCACCTGCATTTATGT AGAGTTGGATAATTTGTTGAGAGGTTGTTGTGGCAACCACTTGCTTGTAGGGGGGATTGGAGGCATTTTTTGTGGTGAATAAGATGCAGGTTGAAAGTTT GTACCTTTTTTTCTTTTCCTTTCTTTTGGGGTCAATTTGGTACACCCTTGAAATGGAGCACACAATTCAGGGATGTATGGAAAACTCAACTGAATATTTA CCCCATTTTAAGGGGTATCAAATTGAATGTTGACCTTTTTCTTCTTGTTTAGAGATCCATATACTTTTGTGTATCTTGGTTTCTTTGGTTGGAGAAATTA TGCCCAATTGAACATACAAGAGTTTTTTTAGAATGGTAACTACTATGTGGTGTTTGTAAGTGCAAAAAGGTGGAGGATTTGTCTGGAAAAGAATATGAAA AGTAAAATAAAGTAAAACAAGGAAAAACCATGAGCAATACTTAATCAAATGGTTTCATTATTCTGTGCACAACTGGTGAAAATGACATCAAGTATTAAAC TTCCTTGG
• Tissue: pods
• Gene name: LI_gene_180932;
• Additional information: details;

Expression of Ll_transcript_386412

FPKM

• PAB: 5.1
• PNAB: 1.9
• PS1: 3.5
• PS2: 1.7
• PS3: 1.7
• PW1: 0.4
• PW2: 0
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386412

• Blastp: Zinc finger CCCH domain-containing protein 3 from Arabidopsis with 41.94% of identity
• Blastx: Zinc finger CCCH domain-containing protein 3 from Arabidopsis with 48.29% of identity
• Eggnog: zinc finger(COG5063)
• Kegg: Link to kegg annotations (AT1G04990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461679.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;