Ll_transcript_386393

• Id Trinity: TRINITY_DN50911_c0_g1_i3
• Name Transcript: Ll_transcript_386393
• Sequence: TTCACGATCCGAAAATTTCTAAACACTGAAAACTTACAACCATCAAAATCTAATTTCACCACAATTTGGAATATTATTATATCTCTTTTAAGATTTTACG TTTGATTCTTCACAATCTTATCTCTGATTCTTTACCTTTTCTTATTTGGTTTTATCTTACCTGCAAAGTTTTAATCTTTGTCTCTTTTTGTTAATTTACC ATCTGGGTAAGTGAATTTGCGAGTGTTTTCTTCTTAAATGCTCAAAAGGGTGTTCTGGTTTTGATTGAACAAGCAAACATAGCAAAAGGGTTACCCCTAA ACATTTTAACGCTACCAGATGTCAGAAAATAGACACCCTCTCACGAATGCTGTTTCTAATCACTCTGGTGATAACATTGAAGAAGCCGTTCTACGTTTGA ATATCAATGATAACCAGGATAGAGATGCTGCTGCTCAATCAATTCCATTTCCAGAACGACCCGGTGAACCTGACTGCTTATATTATCTGAGGACTGGAAT GTGTGGTTATGGGAGTGCCTGCCGCTATAACCACCCTGCAAATGTTTCACTGGGTATTCATTATGGTGAAGAACTCCCTGAGAGAGTTGGGCAACCTGAT TGTGAGTATTTTCTAAAGACAGGGACGTGCAAGTACGGTTCGACATGTAAATATCACCATCCAAGGGACAGGCGAGGTGCTGCTCCTGTATCATTCAATT CGTTAGGCCTTCCCATGCGTCAGGAAGAAAGGTCATGTCCCTATTACATGAGAACCGGGTCTTGTAAGTTTGGAGTAGCATGCAAGTTTCATCATCCTCA GATTGGAGCTTCCCCTGTGGCTGGATCTCCGACCTCAACTATTCTTCCGACATCTGGTTTACCATATGTTGGTGGGTTTTCTGCATGGCAAATACCAAGA ATGTCATATTTATCTGGGCAGGGTATTCAATCTTATGTACCTCCTTTTCTGTCTTCTCCACAAGGCATGATACCTGCACAGAACTGGAATACCTACATGG TCAGTTAAGGCTGTTGAATTTCCTATTTAGTATATGTATTTGCGGTATGCTCTAGTCTTTATTATTTTATTCCATACAGTGCTATCCTATCATTGATTGT GATGCTGACTGGTATGATTTCTCACAATGAAAGATCACATACATGCAAGTTTTGGATAAGTGTATGTAGCATTAGCTGTTATCTACTTACTTGGAAGAAC AGTGAGTTTGTCTGATATATCTAGATTAGGAAATCTTGCTACCATCTTTTACTATCAGATTTCATAGACATTGCAAGATACTTTATACAGAAAGTGATTT GTGCATGACATTTATGTTATTCCTTAAGCTCCTCATTTTATTTGTTTATTGATTTCCAAGTGCATTTGACATTCATACACATTTTAATATCTGAAGCAGA ATGTGCATTGTTCCTTAGGTAAGCTCTTCATAGCATGCATCTTCAGTGATAAATTGATAATTAATTATGTTCAATTTTGGTTATTAGATACTGTCAAGTG TCAATGGTACAATAATGCAACTTAGATTGACATTTTTTTTGTTTTGACTTTGATTTTCTTACTCATATTAGGGGAGTATGAGCGGGGCAATAACTACCGG TTTTCTTGGATCTAATTTTGCACCAGTTCTTGGTGGTCAGTTAATAAGTCCAACTCTCCCGGAGAGACCTGGTCAGCCAGAATGTAAATACTTTATGAGC ACTGGTACCTGCAAATATGGATCTGATTGCAAGTACCACCACCCAAAAGAAAGAATTAATCAATCATTGATGAATCCACTTGGTCTTCCTGTCAGACCTG GACATGCTATATGTTCTTATTATAGACTCTCTGGAATATGCAAGTTTGGCCCAACATGCAAATTTGATCATCCAATTTTGGCAATTCCTCAGAGCTATGG CTTGACCTCCTCACATGCTTTCTCTGTACCCGATACATCTCTGATTAACGGTCGAAAAGTTTTATCAACTGTCCAACCACCCGATACATCTATATCTAAA TTATCAAATGACAAGGTTCATCACTCTGATACAAAAGCTACCGAAAATTCATCCGAACAAGCTGATTCTACTACACTAGATTCCTTAGCAGCCACCTCGG AGTCGTAATTTAGATGACTAAACTGCTTCCAAGTTTGTTATTTTTTGGGGACATTTTTCCATATTTTAAGGACAGACAGCATATCATACATACCTCCTGT TCCCCCTTTTCACCTGCAATTCTGTGGAGTTGGATAGTTTGATAAGAGGTTGTTGTGACAAACACTTGCTTGTGGGGATATGAGGCATTTTTTTGTGGTG AATAAGATGCAGGTTGAAAGTTTGTGACTTTTACTTCTTTTTTCTTTTCCTTTCTGTTGGGGTCAATTTGGTGCATACTTAAAATGGAAGTACAAAACTC AGGAATCTAGGAAAACTCAACTGAAGTTTTTATCCCATTTTTAAGGGGTACCAAATTCATTATTGATATTTTTTTTTCCTTCTTTAGGGATCCATAAATT TTCATTTTATGTGACATGTTCTTGAAATTATGAGAAATAACTGGATTCTTATATACTTGTTTCTTTTGCTAGAGAAATAATGCCCAATTGAACATAGGAG AGTTTTCTTTTTTAGTTTGGTAACCACTATTGTTGGGAGTCATAATGTGGTCTGATATTGAAGATGGTGGTCTTATGGACCGGAGTGAAGGAGGTTATGG GTTCGAGTCTCACCATCAACAAAAAGTTTTGATGGCTAGAAAAGACTCAGGTTTGATTCTTTTGTTGCACCACGTTGAATAGAAGCACGTGTTCTCAAGC TATACACGTTGGATAAGGAT
• Tissue: pods
• Gene name: LI_gene_180932;
• Additional information: details;

Expression of Ll_transcript_386393

FPKM

• PAB: 1.7
• PNAB: 6.5
• PS1: 7
• PS2: 4
• PS3: 6.8
• PW1: 2.2
• PW2: 2.3
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386393

• Blastp: Zinc finger CCCH domain-containing protein 3 from Arabidopsis with 51.05% of identity
• Blastx: Zinc finger CCCH domain-containing protein 3 from Arabidopsis with 44.48% of identity
• Eggnog: zinc finger(COG5063)
• Kegg: Link to kegg annotations (AT1G04990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455851.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;