Ll_transcript_388335

• Id Trinity: TRINITY_DN50912_c0_g5_i1
• Name Transcript: Ll_transcript_388335
• Sequence: ATATATTACATTTTTGTGGATGATTGATAGTGTAAGGTATCGAAAATTCAAACAATTGATTTGCGGCAAAACAGTGAAGTGCCATGGAAGCAGAAGAAGA ACCTCACCATTCTCATGTTTTTCCGATTGAAGATATGAAGAATGTGGTTGCAACTGTGAGTGGCTACCATGGATTGGAGCGATTCCATCTCATCAAGTTG ATTTCATATACCGGTGCTAGTTATGTTGGGAGGATGGAATCGAAATCAATCACACACTTGGTTTGTTGGCAATTCGAAGGAAAAAAGTTTGATATTGCCC AAAAGCTCAACATTATTGTAGTCAACCACCGATGGATTGAAGATTGCATAAGGGAAGGAAAGCGTGTACCAGAAGATTCTTATATTTGGCAAAGTGGTCA TGAAGCCGGGCCACTGTTACTAAAAGATCCTCCACGCACTGTTCAAGCAAATAGCTTGAAAAAGAAGAAAGTGGTTAGTGACAGGTCATGTGATATTGGT TCTGAAAAGCAAACAACTGCCTCAAGTTCTGGTAGTCAGCACGTGGAGTTAAATTCTCATTCTTCTAGTCGATTGCGGAAACAGAAAAGAAATATGTGCA ATGATAATGGAATTAGTACTGTATCTGGATCTTCTCGTAAAGGAAGAAGGCTAGCGAAAAATATTGTAGATGAAGTGTTCTTGGATTTAACCCGGGAAGA GGACCAACCTACCAGAGTAAATAGAGTACACACTGATGCTGCAGCTACCTCTAGTCATTCTGGTGGTGTCAATAACAAAAATAGTCTAGAAAATAGAGAT GGGCTAGATGCCAGATTACGTAATCAAAGTGGAGCTATGAACATAGCTTCAGATGGCATTGAACAAATAATTGATTCAAATAATGTATCTACCAATAGAA ATTCAACTTTGTTAGAAGATTCTTTACCTATGGCACAAACATCAGTTTGTTTTAGTGCTGAGAATTCCACAGATAGTGGTCAGATTGATATTGTTGGTGC TTTACCTACTTCAAAAGAGCTGTCATGTGTTATATGTTTCGAAGAGTACAGCTCAACAAGAGGAATTTTGCCGTGTGGACATCGGTATTGTTATACATGC ATCCAGAGTTGGGTTGATCTTAGGACTTCAATGGGAAAAAGTTCAACCTGCCCGTTGTGCAAGGCAAGTTTTGTGATGTTCAAGAAAGTTGAGGATGCAG CCACTGGTGATCAAAAAGTATATTCCCAGACAATCCCATCTGGCAATTCAACCTCAGATATTTTTGTCCGCACGGTTCAAGAATTACCCGATTATGGTTT TGAGTCAGGTGCTTGCGTAATTTGCCGTGGTCGGGAACCTGAGGATCTGCTCCAGAGCTGTGACGTTTGCCGATGCCGAAGAATCCATCTGTATTGCCTG GACCCTCCTTTACTGCCTTGGACATGCAATCACTGCAAGGATCTTCGGAGGCTTTATCATCATCACTCTTATTAGTACTCATCTTTTAATCCATTGCAAT GTGAGTCATCTAGTTTGCTAGTTCTTCCTGTTTTTGGATTTTGACATGAAAATATGCAACAGGGAAGATAGATTCAGATATAGAAATCCAATTCTTGATG AGAGTACTTAAGATGTTACAACAAGCCATTCCTTCTCTTCCTCTATTGAACAACAACATTGTCATTATGCAAGAAGATGAAGGATCCAACATAGGTAATG CATTACAATGCAATGAAATGATTGTTATTATCTAGATTAGTAACATTAAAAAACAAAAACAAAACTAAAGCAATTCTTCTAGCAAGGAATAAAGATCAAG ACAAGGAAACAATACTAGTGTTATTAATACCGCACTGGTCATCAAATCTGGT
• Tissue: pods
• Gene name: LI_gene_180939;
• Additional information: details;

Expression of Ll_transcript_388335

FPKM

• PAB: 0.5
• PNAB: 3.6
• PS1: 2.5
• PS2: 1.2
• PS3: 2.1
• PW1: 2
• PW2: 1.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388335

• Blastp: BRCT domain-containing protein At4g02110 from Arabidopsis with 32.98% of identity
• Blastx: BRCT domain-containing protein At4g02110 from Arabidopsis with 32.98% of identity
• Eggnog: Topoisomerase (DNA) II binding protein 1(ENOG410XPFH)
• Kegg: Link to kegg annotations (AT4G02110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428742.1)
• Pfam: BRCA1 C Terminus (BRCT) domain (PF00533.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;