Ll_transcript_388339

• Id Trinity: TRINITY_DN50912_c0_g5_i3
• Name Transcript: Ll_transcript_388339
• Sequence: ATCAAAATCAATCACACACTTGGTCAGTATATTTTGTTTGTGTCAGTAATTGATTTGAGTTGAATGTTCCAAATGTGTGTGTCTAAAAGCCTTTTTGTGT AGAGTAATTTTGTAAAAGTGTTTTTTTTTTCAAAATCTCGTGTAGCTTTTCAGAAAAGCCGAATTTCTGGTTTATTAGGAGTTTTTTATTTGTTAGCTTG TATCAATGGTGGATGTATGTTGAGTGTTTCAAGTTTGTGTGCTTGGGATGTGTATTCTGCTTCTCTATAAAAAAAAATAGATTAAAAAATCACTTTTGAT ATTTAGATTTTTGTCTGGTTGGAATTTTACTTAAATGTAGAAGTTTAAAGAAGTTGATTCAGCTTTATGTGAAACTTTATTCACCAGTTTCTCAAAAAAT CACTTTTTTAAGTGCATCTTAGAATTATTTTTTAAGGCTAAAGAAATGGACCTAATGTGGATGTGAGTTTTAACTGAAGAGGAAGGGTAAAGAATAAGGA ACAACTTGTTTGTTAGCTGAATGAGTGGGGGTGATTCTGTTTGATGAGTGTTTCTTTTGTATTTGAGTGATTAGGTTTGTTGGAAATTCGAAGGGAAAAA GTTTGATATTGCCCAAAAGCTCAACATAATTGTAGTCAACCACCGATGGAGTGAAGATTGCATAAGGGAAGGAAAGTGTGTACCAGAAGATTCTTATATT TGGCAAAGTGGTCATGAAGCCGGGCCACTGTTACTAAAAGATCCTCCACGCACTGTTCAAGCAAATAGCTTGAAAAAGAAGAAAGTGGTTAGTGACAGGT CATGTGATATTGGTTCTGAAAAGCAAACAACTGCCTCAAGTTCTGGTAGTCAGCACGTGGAGTTAAATTCTCATTCTTCTAGTCGATTGCGGAAACAGAA AAGAAATATGTGCAATGATAATGGAATTAGTACTGTATCTGGATCTTCTCGTAAAGGAAGAAGGCTAGCGAAAAATATTGTAGATGAAGTGTTCTTGGAT TTAACCCGGGAAGAGGACCAACCTACCAGAGTAAATAGAGTACACACTGATGCTGCAGCTACCTCTAGTCATTCTGGTGGTGTCAATAACAAAAATAGTC TAGAAAATAGAGATGGGCTAGATGCCAGATTACGTAATCAAAGTGGAGCTATGAACATAGCTTCAGATGGCATTGAACAAATAATTGATTCAAATAATGT ATCTACCAATAGAAATTCAACTTTGTTAGAAGATTCTTTACCTATGGCACAAACATCAGTTTGTTTTAGTGCTGAGAATTCCACAGATAGTGGTCAGATT GATATTGTTGGTGCTTTACCTACTTCAAAAGAGCTGTCATGTGTTATATGTTTCGAAGAGTACAGCTCAACAAGAGGAATTTTGCCGTGTGGACATCGGT ATTGTTATACATGCATCCAGAGTTGGGTTGATCTTAGGACTTCAATGGGAAAAAGTTCAACCTGCCCGTTGTGCAAGGCAAGTTTTGTGATGTTCAAGAA AGTTGAGGATGCAGCCACTGGTGATCAAAAAGTATATTCCCAGACAATCCCATCTGGCAATTCAACCTCAGATATTTTTGTCCGCACGGTTCAAGAATTA CCCGATTATGGTTTTGAGTCAGGTGCTTGCGTAATTTGCCGTGGTCGGGAACCTGAGGATCTGCTCCAGAGCTGTGACGTTTGCCGATGCCGAAGAATCC ATCTGTATTGCCTGGACCCTCCTTTACTGCCTTGGACATGCAATCACTGCAAGGATCTTCGGAGGCTTTATCATCATCACTCTTATTAGTACTCATCTTT TAATCCATTGCAATGTGAGTCATCTAGTTTGCTAGTTCTTCCTGTTTTTGGATTTTGACATGAAAATATGCAACAGGGAAGATAGATTCAGATATAGAAA TCCAATTCTTGATGAGAGTACTTAAGATGTTACAACAAGCCATTCCTTCTCTTCCTCTATTGAACAACAACATTGTCATTATGCAAGAAGATGAAGGATC CAACATAGGTAATGCATTACAATGCAATGAAATGATTGTTATTATCTAGATTAGTAACATTAAAAAACAAAAACAAAACTAAAGCAATTCTTCTAGCAAG GAATAAAGATCAAGACAAGGAAACAATACTAGTGTTATTAATACCGCACTGGTCATCAAATCTGGT
• Tissue: pods
• Gene name: LI_gene_180939;
• Additional information: details;

Expression of Ll_transcript_388339

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.3
• PS3: 0.5
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388339

• Blastp: -
• Blastx: BRCT domain-containing protein At4g02110 from Arabidopsis with 46.94% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428742.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;