Ll_transcript_388354

• Id Trinity: TRINITY_DN50912_c0_g5_i4
• Name Transcript: Ll_transcript_388354
• Sequence: ATATATTACATTTTTGTGGATGATTGATAGTGTAAGGTATCGAAAATTCAAACAATTGATTTGCGGCAAAACAGTGAAGTGCCATGGAAGCAGAAGAAGA ACCTCACCATTCTCATGTTTTTCCGATTGAAGATATGAAGAATGTGGTTGCAACTGTGAGTGGCTACCATGGATTGGAGCGATTCCATCTCATCAAGTTG ATTTCATATACCGGTGCTAGTTATGTTGGGAGGATGGAATCGAAATCAATCACACACTTGGTTTGTTGGCAATTCGAAGGAAAAAAGTTTGATATTGCCC AAAAGCTCAACATTATTGTAGTCAACCACCGATGGATTGAAGATTGCATAAGGGAAGGAAAGCGTGTACCAGAAGATTCTTATATTTGGCAAAGTGGTCA TGAAGCCGGGCCACTGTTACTAAAAGATCCTCCACGCACTGTTCAAGCAAATAGCTTGAAAAAGAAGAAAGTGGTTAGTGACAGGTCATGTGATATTGGT TCTGAAAAGCAAACAACTGCCTCAAGTTCTGGTAGTCAGCACGTGGAGTTAAATTCTCATTCTTCTAGTCGATTGCGGAAACAGAAAAGAAATATGTGCA ATGATAATGGAATTAGTACTGTATCTGGATCTTCTCGTAAAGGAAGAAGGCTAGCGAAAAATATTGTAGATGAAGTGTTCTTGGATTTAACCCGGGAAGA GGACCAACCTACCAGAGTAAATAGAGTACACACTGATGCTGCAGCTACCTCTAGTCATTCTGGTGGTGTCAATAACAAAAATAGTCTAGAAAATAGAGAT GGGCTAGATGCCAGATTACGTAATCAAAGTGGAGCTATGAACATAGCTTCAGATGGCATTGAACAAATAATTGATTCAAATAATGTATCTACCAATAGAA ATTCAACTTTGTTAGAAGATTCTTTACCTATGGCACAAACATCAGTTTGTTTTAGTGCTGAGAATTCCACAGATAGTGGTCAGATTGATATTGTTGGTGC TTTACCTACTTCAAAAGAGCTGTCATGTGTTATATGTTTCGAAGAGTACAGCTCAACAAGAGGAATTTTGCCGTGTGGACATCGGTATTGTTATACATGC ATCCAGAGTTGGGTTGATCTTAGGGTATGACTTTACCTTTTCTTCTCTTTTTCATTCTTATTATTGAAAGCCTATTAATTGATTAGTACAATATGCTCTT GCATGCCATTTTCATTTGAATAGATTACAAATTTTAATTTTTAACCAAAAAATGTTATTAGCTTTGATTCATCAACTAATAGTTTGCCTTCTGATTTCTT ATTGGGAATTTGAGGCACCACCTAGTTAACAAAATTTGCTTTGTTTTTCTTATTTGAACCATTTTGGTAGTAACTTAGTATGTATATTTGAACATTATTC AGGCTAAGGTACTGTAACTCCCCTTTAACTGTGAAGCTGTTTCAAAAAAGGCGTACTTGAAGATTTTAATCACATTACATTTTGATCTGCTATTGTCACT CGACTTTTTTACATATTAAATCATGTCAGCTCTGGTACAAAACTTACCATTATGAGACATGACTTATCCAAATATAGATTGAATGGGTCAGGATTTTATA CAATGCCTCTTTTATTTAAAGAGACACACGTAGACAACAGTTAATCCTTTATGTTCAGAACCAATATATCCCCGACTGTGAAATGATGTTTTAGCATCTT TGCTCGTTATGTTTATTCCTTCACCTGGTTAGAAATGCCTGTTGTTGTGCGTTTGTTTTAGTTTCTGCATGCAACAGTAGAGTTTTCATGGGGAATGTTG ACTGGATCATGTACAACTTGTCTGTCCAGTACAGCTTTACTCTAATGCCTGTTGAATGTGTCTTTTATTTCATAATTGCTTATCAATATTTATAGACTTC AATGGGAAAAAGTTCAACCTGCCCGTTGTGCAAGGCAAGTTTTGTGATGTTCAAGAAAGTTGAGGATGCAGCCACTGGTGATCAAAAAGTATATTCCCAG ACAATCCCATCTGGCAATTCAACCTCAGATATTTTTGTCCGCACGGTTCAAGAATTACCCGATTATGGTTTTGAGTCAGGTGCTTGCGTAATTTGCCGTG GTCGGGAACCTGAGGATCTGCTCCAGAGCTGTGACGTTTGCCGATGCCGAAGAATCCATCTGTATTGCCTGGACCCTCCTTTACTGCCTTGGACATGCAA TCACTGCAAGGATCTTCGGAGGCTTTATCATCATCACTCTTATTAGTACTCATCTTTTAATCCATTGCAATGTGAGTCATCTAGTTTGCTAGTTCTTCCT GTTTTTGGATTTTGACATGAAAATATGCAACAGGGAAGATAGATTCAGATATAGAAATCCAATTCTTGATGAGAGTACTTAAGATGTTACAACAAGCCAT TCCTTCTCTTCCTCTATTGAACAACAACATTGTCATTATGCAAGAAGATGAAGGATCCAACATAGGTAATGCATTACAATGCAATGAAATGATTGTTATT ATCTAGATTAGTAACATTAAAAAACAAAAACAAAACTAAAGCAATTCTTCTAGCAAGGAATAAAGATCAAGACAAGGAAACAATACTAGTGTTATTAATA CCGCACTGGTCATCAAATCTGGT
• Tissue: pods
• Gene name: LI_gene_180939;
• Additional information: details;

Expression of Ll_transcript_388354

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.3
• PS3: 0.2
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388354

• Blastp: BRCT domain-containing protein At4g02110 from Arabidopsis with 32.98% of identity
• Blastx: BRCT domain-containing protein At4g02110 from Arabidopsis with 32.98% of identity
• Eggnog: Topoisomerase (DNA) II binding protein 1(ENOG410XPFH)
• Kegg: Link to kegg annotations (AT4G02110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428742.1)
• Pfam: BRCA1 C Terminus (BRCT) domain (PF00533.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;