Id Trinity | TRINITY_DN50917_c4_g1_i3 |
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Name Transcript | Ll_transcript_387899 |
Sequence | CACACACTCCTCACTCACCCTCATTCTCACAAACAATGCTTCCCATATTCTTCCTCTTCCTTCTTTCGATCCCCTCATCACCACTCACCATTCTCTCTCT CAACCAAGAAGGTCTCTCCCTCTACCAATTCAAACTCCTTCTCCAAGACCCTGACTCTCGCCTCTCCTCCTGGAACCCCCTCGACCCCACCCCATGCAAC TGGTACGGCGTCACCTGCGCCTCCCCCACCGCCACCACCGTCACCACCCTCGACCTCTCCAACACCAACATCGCCGGCCCATTCCCCACCACCATCCTCT GCCGCCTCCCTAATCTCACCTCCATCACTCTCTTCAACAACTCCATCGACCAAACCCTCCCTCCTTCCATTTCTCTCTGCCAAACACTCACTCACCTTGA CCTGTCTCAGAATCTAATCACTGGGTCACTCCCTCAATCACTTTCTGAACTTCCGAATTTAACTTATCTTGACCTTACTGGAAATAACTTCTCTGGTCCT ATTCCGTTTTCGTTTGGAATGTTCCAGAAGCTTGAAACGTTGTCGCTTGTTTATAATCTTCTAGAAGGTTCTATCCCTTATTCTTTAGGAAACGTTACTA CACTTAGAATGCTTAACCTCTCTTTTAACCCATTCTCACCTTCTCCGGTTCCTTCCTCTCTCGGAAACTTGACAAACTTGGAAGTTCTATGGCTCTCTCA GTGTAACCTTGTGGGGCCCATTCCTGAGGAGTTTGGGGGATTGGAAAGTCTTGTGGTGTTGGATCTTTCGATGAATGGTTTGGATGGGAAGATACCGAGT TCGATTACTGGGTTGACTCGTTTGTGGCAGGTTGAGTTGTTTAATAACTCGTTATCGGGTGAGTTGCCGGTTGGGATGGAGAATTTAACTGCATTGAGGC TTTTTGATGCTTCAATGAATCGTTTGAGTGGGAGGATTCCTGATGGGTTGACTCGGTTACCGTTGGAGAGTCTTAACCTTTATGAGAATTTGTTTGAGGG TGAGTTGCCGGCGAGTTTGGCGGATTCGCCGAATTTATATGAGCTCAGGTTGTTTGGGAATAGGCTCTCTGGGAAGTTGCCGGCGAATTTGGGGAAGAAT GCGCCGTTGAGGTTGATTGATGTTTCTAATAATCAATTCTCCGGTGAGATTCCGGCGAGTTTGTGTGATCGCGGTGAGTTGGAGGAGATTTTGATTATAT ATAACTCGTTCTCTGGTGAGATTCCGGCTAGTTTGGGAGCGTGCCAGAGTTTGATGCGGGTTAGGCTCGGATACAATAAGTTTTCCGGCGAGGTTCCGCC GGGATTCTGGGCCCTGCCTCGTGTTTATCTGCTTGAACTTGTTGATAATGAGTTTAATGGTTCGATCGCGAGGACTATTGGTGGGGCGGTGAATCTATCG CTGTTGATTCTGTCAAAGAATAATTTCTCAGGATGGATTCCTGAGGAGATTGGGTGGTTAGAACATCTTGAGGAATTTTCAGGTGGTGATAACATGTTCA ATGGTTCTCTGCCTGATAGTATTGTGAACCTTAGACAGCTTGGGACTCTTGATCTTCATAACAATAAGCTCTCAGGGGAACTTCCTAAGGGGATTAAATC ATTGAAGAAACTCAATGAGTTGAATTTGGCTAATAATGACATTGGTGGGAATATCCCTAATGATTTTGGGAGTTTGCTTCAGCTTAATTTCCTCGATCTT TCGAATAACAAATTTTCAGGCAGAGTCCCTCTGGGGTTGCAGAATTTGAAGCTGAATGAGCTTAATTTGTCTTATAATCAGCTTTCTGGTGAAATTCCCC CAATGTTGGCTAAGGATATGTACAAGGCTAGCTTTGTGGGTAATCCTGGCTTGTGTGGTGATTTGAAAGGCCTGTGTGATGGGGAAAATGAGGAAAAGAA GGCTTCGGGTTTTGTTTGGTTGCTTAGATCTCTCTTCATTGTTGCCACATTAGTGTTTGTTGTCGGTGTGGTTTGGTTCTACTTCAAGTATAGGAATTTC AAGAATGGCAAAGGAGGTATTGATAAGTCTAAGTGGACTTTGATGTCATTTCATAAACTGGGTTTTGGGGAAGATGAGATTTTGAACTGTCTTGATGAAG ATAATGTGATAGGAAGTGGATCCTCCGGGAAGGTCTATAAAGTTGTACTTAGCAGTGGGGAGGCCGTGGCTGTGAAGAAGATATGGGGAGGGGCTAAAAT GGAAACTGGGAGTGGAGATGTCGAAAAGGGTAGGATTCAAGACAATGCTTTCGATGCGGAGGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATTGTC AAGCTATGGTGTTGCTGCACCACTAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCGAATGGTAGTCTTGGTGATTTGCTGCATAGCAGTAAAGGAG GGTTGTTGGATTGGCCAACTAGGTTTAAGATAGCTGTAGATGCTGCTGAAGGTCTCTCTTATCTGCATCATGATTGTGTTCCACCGATTGTCCACAGAGA TGTAAAATCTAACAACATCTTGTTGGATGGGGACTTCGGTGCAAGAGTGGCAGATTTTGGAGTCGCTAAGGTAGTGGAATCCAATGGAAAAGGAACTAAG TCCATGTCCATCATAGCTGGGTCTTGTGGGTATATTGCACCAGGTTTGTAGTTATATCCTGTTATTTAATTGTAGTTTTTCATAACGTTTAATCTTATTT TGATGAATCTGAGATACATTTAATGTACTACTTGCGCTTAACTCATAATCAATGTTTTTGTTTAGTTTATCACATTTTGGATCTTTTAATGTAGAGCTTG GTCTGCAATTGCCTAACTATCTGTGCAGGGGAATCAATCCTTTTTCATGGCCATAGAAGTATAACAGTGTTGCTCTTTTTCATTTTTGGTACAAAAACTA TAACAACGTTGTTTTTTTCCTTGATATGAAAACTGTAACAATGTTAATCTATAAAAAAGGGCAAGCTACTACACAATGGCAACTTTGCCTGCCTCGTGAC CTGAAAGTCACGAGTTTAAATTCTATAAACAACATTTCGCTTGTGAAATGTAAGACAAGGTACATCTACCCTTCTCAGACCTCACTTGGTGGGAGCCTCG TTTAGCCGACTACCCTTTTTATGGTGTTCCTATCAAATGGTTTATTTGGTTACATAGCTCTTCTTAGTAACACCTTTAGATTATCATGTGCTACAATGAT TAACTTCTATTCTATGTTTGACTGTAATAATATATTCTCTTTGGAGCCTAACTGACACTGTTCTTTCCTTGTGCAGAATATGCATACACACTTAGAGTGA ATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGGAAGCCTGTAGACCCTGAATTTGGAGAAAAGGACTTGGTTAC ATGGGCATGCAGTACCTTGGATCAGAAAGGTGTAGACCATGTTCTTGACTCAAGGCTTGATTCTTGTTTCAAAGAAGAAATTTGCAGGGTCCTCAACATT GGCCTCATGTGCACTAGTCCTCTTCCAATCAACAGGCCTGCAATGAGAAGAGTGGTCAAGATGTTGCAAGAAGTGGGCATAGAGAACCAAGCCAAGTCTT CCAAGAAAGATGGAAAACTGTCCCCTTATTACTATGATGATGGGTCAGATCATGGAAGTGTTGCGTAATTCAAGTTCTTGCAAGGGTAGGAATATTTGAC TCTCAAGGGTGGAGTTCTTGGCTTTTCTTTTACGATAAAAAAGCTGGCTTAAAAGAAAAGGGAAGAGAAATTTTGTTTCTTGGGTTGAAAATAGAGTTGA TATTTTTACCCTGTAAAGTTGGTCAACATCAAGGCAATTCTATAAACAAATTTGAATTGGTGATTTGCATTAATGCCTACTATATTTAGAAATGATATTC TCACTATTAAAAAAAGATATGATGTGTCCTGTAGCATAGGTTAGAGCATATCCAATGATAAATAACATCTTTATTTTTATTTGAATATTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_180985; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387899
Blastp | Receptor-like protein kinase HSL1 from Arabidopsis with 67.37% of identity |
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Blastx | Receptor-like protein kinase HSL1 from Arabidopsis with 66.82% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT1G28440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425840.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |