Ll_transcript_388965

• Id Trinity: TRINITY_DN50918_c2_g1_i10
• Name Transcript: Ll_transcript_388965
• Sequence: CATATTTTTATTTCTCTGGTTTCTTTTTTCTTTGGTTTCTGATATCAATAGAATTAAAAATCCCTCCTTTTTGTTCTTCCGTGTTGAAACTTACACAGAA GAATCATACCCAGATGAACCTGAATTCACAACATTCTATTCCACATCAAATCTTATTTTCTCTGATGCATCTATCATTACATGGAATCACACCAACCACC ATCCGAAATTTGATTTGATTGTGTTGGGTTTTCTGTCTTATCCTTTGTTGTTGTGATTTTAGCTGAGAAAGGAAGAAACAATGGATTCAGAAAGCGTTGA TAGTAGTATATCTTCATTGACAATGATAGATGAAGATGTGAATCCTCATCAGTTTTCTTCAATCAACACAAAAATACGAAGTAATGGACCTATTGCTAAC AGTGTCCATGAGCTTCTTCAATGCCCCGTTTGCACCAATTCTATGTACCCTCCAATCCATCAGTGCCACAATGGACATACCCTTTGTTCAACTTGTAAGA CAAGGGTACACAATCGATGCCCAACTTGCCGACTTGAACTCGGTGATATAAGGTGTCTGGCATTGGAGAAGATAGCAGAATCACTTGAACTGCCATGCAG ATACACCTCTCTTGGGTGTCCAGAGATATTTCCCTATTACAGCAAACTCAAACATGAGTCTATTTGCAACTTCAGACCTTACAACTGCCCATACGCCGGG TCGGATTGCTCAGTTGTTGGGGATATTCCATACCTTGTTACTCATTTAAGGGATGACCACAGAGTTGATATGCATTCTGGATGCAC
• Tissue: pods
• Gene name: LI_gene_180989;
• Additional information: details;

Expression of Ll_transcript_388965

FPKM

• PAB: 6.1
• PNAB: 7.3
• PS1: 7.5
• PS2: 8
• PS3: 9.6
• PW1: 9.9
• PW2: 8.5
• PW3: 7.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388965

• Blastp: E3 ubiquitin-protein ligase SINAT3 from Arabidopsis with 67.21% of identity
• Blastx: E3 ubiquitin-protein ligase SINAT3 from Arabidopsis with 86.36% of identity
• Eggnog: e3 ubiquitin-protein ligase(ENOG410XVP0)
• Kegg: Link to kegg annotations (AT3G61790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429063.1)
• Pfam: Seven in absentia protein family (PF03145.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;