| Id Trinity | TRINITY_DN50921_c4_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_388877 |
| Sequence | CTCGGGATACAACCATGACTTATGATTCTTCAAACAGTATAGCAGTATTCATGATATTATTTTCCTATTTATTGATATGAATACTGCTATACTGTTTGAA GAATCATAAGTCATGGTTGTAACCTGAGAGGAATATAAGACCTAGATAATTTCTGTTATGTTTGTGACTTAATAAAGGTATATGCATAGGTAGCTGTATT CTTAATTCCATTCAGTTGATAATGGCAGATATAGAAATTATTTAAAAAACATAACCATGATTTTGACATCTTTATTGATATAATTTACAGAGGTAGTCTT TATGTCTGATACACTGATCCTTAAGAGCAATTGATTAGGTTCTTGGCAGATAATTTCATACCATATATAAATTGTACTGTTGGATGGAACAAATGTAGTT GTTGAATTACAAGATGCCACTGACAGAAACTTGATCAGTATAGGGACAAGTTGTCGACAGCTTGTCAAAAATGACCAGCATCTCTGATTATTGGACAGAT TTTGCTATTGCAGTTGTAATCTGGTGCAAAATTTAAGGATAAGTTGATAATAAAATTAGAAAGCGAAGTTATAGACTAAAGCTGAATGATTTATGTTACT AGTTTGAGGGAGTACCCCAGTTTTATTGCTTTGGCTGGTAGTTGACTGTATTGAGTCCGTGGCTGGCTCAGCTGGAGACTGATAGGAGCATGTAAATCAT ACCCATCTGTGATAGTGTATGAAGTGTCGGATGCCACGTTTTCTTCATTTACACCTGCTTCAAAAACCTTATACCCAATTCTTTTTTTTAGTTTTGGCTA AACTAAATTTGAAAACATTAGCTTCTACATAAATATCGCTATTATATCTAATAAATGAGGGAACGCTTTTGATATGGCCGGGCTTGTTTATTTTTTATGC CTCACTTTGTTACACACACATATATATATATATATACATATTTAAGAAAAAAAGGAATAACTGATTCTTAAATTATAGAATGCATTTTTTGATCATTTAC CTTCTTCTGTAGCTCTGCATTTTCTTTATGGACAAGATCCATCTTTTTATGGAGTTCTACATTTTCTTGATGAACGAGATTTCCCTACAATATCATTAGT GGAATTTGATCAGAAATCTGCAGGAAAACCATAGTTGAAACTTGAAACAGCAGGAACAAGATCAGATTCCTGTAACCTTTCGGTGTAGCTCTTTAATCTC GTCCGTCAAAATTTCATCCTAGAAGGAAATAGATGATAATGTTAGAGAATTGTGAATGTGCTATCAAGTCTATGGAATCTTCAATGGAAGAAATTGATTC GAACTGACCCATCTACCTTTTTCACCCGAACACCCTTTAAACTCATCTCCAGTTGGTTTTCCAAATTTTGCAGCTCTTTAATACCCAAACCAGAAAGTTG TTCTCCCATCAGTTGCCTGCTTTTACCAGTTGCTGCCTCAAGCTTGCTGCTTCTCTCTGCCAAAACTAGCAAAGCAAAATACAAATATTAAACATAGTGA GGAGTGATTGACTTCAATTAGGTGAAATAAGAAGCATGTGACATTGTCATTCAAGGAAGATAAGTTTCCCACCTCTCAAATGCTTGATTGATGCCCAACT TGTCCCCTTCCATCAGTGCCACCAAGGGTCTTACAAGAACTGTGTAAATAGAAACAAGAGGTGTTTGCTATTCTTGTTTGGTACGTTGGTACTTCTTTTC CTAGACTAGCATGTATGAATCCAGTATTTGATATGTTTTGAAATTTCGGCATTATGGGTATATTGTACATGTTGATTTGGACATTTCTGTAAGAAATTTT GGGTCATCTTTACTATCTTCGATGATATAAGATTTCTACAATTTCCACATTCTTGGGACCCCATTTGAATCTTTTCAATGCCAAAATTTTAAGAACCAGC TTTTCTAAAGCTAAAGCTATTAGGTGGAGAACCATGAATTATTTTATGTCTGTAACATTTGCTCTCAGGCAAAGCATATTTTGGCTTAAAGCTCAATTTT GATTACATTTGGAAGCTTGTTGGTTTTGTTCCATGAGATACACTGTTTGGTATAAGAAACAGATTAGTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_181011; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388877
| Blastp | - |
|---|---|
| Blastx | Agamous-like MADS-box protein AGL17 from Arabidopsis with 64.71% of identity |
| Eggnog | Transcription factor(COG5068) |
| Kegg | Link to kegg annotations (AT2G22630) |
| CantataDB | Link to cantataDB annotations (CNT0002265) |
| Mirbase | osa-MIR444d (MI0006976) |
| Ncbi protein | Link to NCBI protein (XP_019425955.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |