Ll_transcript_388892

• Id Trinity: TRINITY_DN50921_c6_g1_i2
• Name Transcript: Ll_transcript_388892
• Sequence: GAGTGATCTCTTTTTGCAGTTAAAGTAGCTTTCAAAATTCATAGCTGGCTAGTCAAACTAAACCCACTACACCCAGAAATATGTAACAAAGGACAAGGAG AGAGAGAGAACCAACAAAGAAAACCGAGTGAAATTTTTGACATGAGCCACATTGCGATTTTAATATTTTCATAGTTTTCTGTCCCTCAATCCTTGCCAAA AACAGTGAAAACTCATGAAAGTTTAAAACTTTTCAGGTAACCTTCTTCAATCAAAGAGGACCCATCATTTCTTATAACTATATTTTCCTTCTTCACTCCT TTCTCTTGTCCCCTTTTGATGGATCCCAAGGTTTCAAAGCAGCCACAACAAGAAGGGAATAACAAGATGGGAGATAACAAGATATCAGAAGTGAATGATT TTCAGATTATGATTGCTGAGAAAGAAGATAGCAGCAAGAAACAGTTAGCACCAAAGAGAACTTCAAACAAAGACAGACACACAAAAGTTGAAGGAAGAGG TAGAAGGATAAGGATGCCAGCTTTATGTGCAGCTAGGATCTTTCAGTTGACAAGAGAATTGGGTCATAAATCTGATGGAGAAACAATCCAATGGTTACTC CAACAAGCTGAACCATCTATAATAGCAGCCACTGGAACTGGAACAATACCAGCTTCAGCTTTAGCTTCTGCTGGTAACTCAGTTTCACAACAAGGAACTT CTCTATCTGTAGGGTTGCACCAAAAACTTGATGAGTTAGTTGGAGGGTCTAATATTGGGTCAGGGAATAGGACTAGTTGGGTTGGTGGGAATTTAGGGAG ACCTTATGTGGCCACAACAGGTTTATGGCCACCCCATGTTAGTGTATTTGGGACTGAAGGTTCAAGTTATCTTCAGAAAATTGGGTTCACTGGGTTTGAC TTGCCTGGTGCACCCAACAACATGGGTCATATGAGTTTCACTTCAATTTTGGGTGGTGGGGCTAACCACCAGATGGATGGTTTGGAGCTTGGGTTGGCTC AAGAGGGTCATATTGGGGTCTTGAATCCACAGGCCTTGAGCCAGATTTATCAGCAGATGGGTCATGAAGCTAGAGTTCAGCAACAACAGCAGCAGCAACA GCACCAGGCTCCTACTAATGAGGATGATTCTCAAGGTTCAGAACAGTAGAGTATTTTTTTCTATGGATTTGGGTTTTAAAAGTAGCATTTGCCCAGAGGC TGATGTTTCTATACAATGGCTTTTGTATTGCATAATTGGGAGACTGAGGAAATAGTATATATGTCTCAGAGAATTCAATAGAAACTGGATTTGGTTTTAC CAACCTTTTCTTGTTCCTTCTCCACTATACTCAAGTCTCCAAATAGAGGTG
• Tissue: pods
• Gene name: LI_gene_181021;
• Additional information: details;

Expression of Ll_transcript_388892

FPKM

• PAB: 5.4
• PNAB: 2.7
• PS1: 7
• PS2: 2.7
• PS3: 3.9
• PW1: 7.4
• PW2: 10.5
• PW3: 7.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388892

• Blastp: Transcription factor TCP20 from Arabidopsis with 60.83% of identity
• Blastx: Transcription factor TCP20 from Arabidopsis with 60.83% of identity
• Eggnog: Transcription factor(ENOG410YH53)
• Kegg: Link to kegg annotations (AT3G27010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438642.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;