Ll_transcript_388893

• Id Trinity: TRINITY_DN50921_c6_g1_i3
• Name Transcript: Ll_transcript_388893
• Sequence: AGAGTATATAAAAATGGAGAGATAATAAAGGAGATCCATGAAATATAGGAGGAAGTGGGTTTTTGTGTCTGTATTGAGACAGAGTTATAGTAGTATCCAA GGTAGTGAAACTGGTAGTTAAAGTAGCTTTCAAAATTCATATCTAGCTAGCTAGTCAAACAAAACCCACTACACCTAAAAAGAGGTAACAAAGGACAATA TAGAGAGAGAGAACCAACAAAACAAAAACCAAAGGAGTGAAATTTTTGACATGGGTACTTTGAGATTTCAATATTTTATAGTTTTGTCCCTCAATCCTTG CCAGAAACAGTGAAAACTCATGAAAGTTTAGGACTTTTCAGGTCACCTTCTTCAATCAAAGAGGACCCATCATTTCATATTATTATTACTTTTTCTTTTT TCACCCTTTTCTTTTGTTCCTTGTTCATGGATCCCAAGGGCTCAAAGCAGCCACAACCACAACAACAAGGTAACAACAACATGGGTGAGAATAATAAACC CTCAGAAGTGAAGGATTTTCAGATTGTGATTGCTGAAAAAGAAGATAATAGTAGTAGTAGTAAGAAGCAGTTAGCACCAAAGAGGGCTTCAAACAAAGAC AGACACACAAAAGTTGAAGGAAGAGGTAGAAGGATAAGGATGCCAGCTTTATGTGCAGCTAGGATCTTTCAGTTGACAAGAGAATTGGGTCATAAATCTG ATGGTGAAACAATCCAATGGCTTCTTCAACAAGCTGAACCATCTATTATAGCAGCTACTGGAACTGGAACAATACCAGCATCAGCTTTATCTGCTGCTGG TAACTCTCTTTCACACCAAGGAACTTCTCTATCTTCTGGCCTGCACCAAAAGCTTGATGAGTTAGGCTCCAATATTGGGTCAGGGAGTAGGTCAAGTTGG GCTATGGTTGGAGGAAATTTGGGAAGAACTCATGTTGCTACAACAGGTTTATGGTCACCTCATGTTACTGGATTTGGATTCCAATCATCATCTGGTCCTT CTACACCTAGTTTAGGTGCTGAAGGTTCAAATTATCTTCAAAAAATTGGGTTCCCTGGGTTTGACTTACCTGCACCAAACATGGGTCCTATGAGTTTCAC CTCAATTTTGGGTGGTGGGTCTAACCAGATGCCTGGTTTGGAGCTTGGGTTATCACAAGATGGCCATATTGGGGTCTTGAATCAACAGACCTTGAGCCAG ATTTATCAGCAGATGGGTCAACAAGCTAGAGTTCAGCACCAGCATCAGCAACAGCACCAGCACCAGCAGCACCAGCATCAGCAGAATCTGCATCAGCAAA CTCCTACTAAGGATGATTCTCAAGGTTCAGAACAGTAGAGTATTTTTTTCTATGGATTTGGGTTTTAAAAGTAGCATTTGCCCAGAGGCTGATGTTTCTA TACAATGGCTTTTGTATTGCATAATTGGGAGACTGAGGAAATAGTATATATGTCTCAGAGAATTCAATAGAAACTGGATTTGGTTTTACCAACCTTTTCT TGTTCCTTCTCCACTATACTCAAGTCTCCAAATAGAGGTGCTTCAATTTTCTCTTCATTTTTTTTCTTCATTATGTTCTCTTGGCTCATTTACAATTTTT CATGTTTATATTTACTATGATGTTAACTTGTAGGTGGAATTGCATGGCCAAATAGCTTGGTTGCTTGGATATGGCCTTAAAACTGTTTTTTAATTCAGAG GTGTGTTGATTATTTTGTTCTTCTCTTGGTCAGAATGGTGTGTTAATCAGTTTGTTTGTGAATTTGGTGATATAGTTTCATAATCATATTTTTATTATAT TTCTTATTGGATCAAGTAGTAGTAGTAGTTCTTTATCATCCAAAGAGTAAATTGTTGTGTGGAATGACACTTACATCTCTTAACCATCAAGGCGTTGGTC TAGCTGCGTAATCAATGGTTCGATTCCTGAGAGCGACACTTGTTGGAAATGACAGCTACGCATCTTGAAAGGGATTAG
• Tissue: pods
• Gene name: LI_gene_181021;
• Additional information: details;

Expression of Ll_transcript_388893

FPKM

• PAB: 0.2
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.1
• PS3: 0.5
• PW1: 0.8
• PW2: 0.9
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388893

• Blastp: Transcription factor TCP20 from Arabidopsis with 59.79% of identity
• Blastx: Transcription factor TCP20 from Arabidopsis with 62.76% of identity
• Eggnog: Transcription factor(ENOG410YH53)
• Kegg: Link to kegg annotations (AT3G27010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458829.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;