Ll_transcript_386664

• Id Trinity: TRINITY_DN50922_c3_g1_i2
• Name Transcript: Ll_transcript_386664
• Sequence: ATATTTGTCGATGAAGTTGACAGTATGTTGGGACGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGGAAGATGAAAAATGAATTCATGGTGAATTGGG ATGGGTTGCGTACAAAGGATACTGAGCGGGTTCTAGTGCTTGCAGCAACTAATAGGCCTTTTGACCTAGATGAGGCTGTCATAAGGAGGCTGCCACGAAG ATTGATGGTAAATTTGCCAGATGCTCCTAACAGAGCAAAAATTATGAAAGTTATCCTGGCAAAAGAGGAATTATCCCCGGGTATTGATTTGGATGCAGTT GCAAGCATGACTGATGGATATTCGGGAAGTGATCTAAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGG AACTTGCTGCTGCTCTAGCAGAAGGTCGACCTGCTCCATCGTTATGTAATAGCGGCGACATCCGATCTTTAAACATGGATGACTTCAAATATGCACATCA ACAGGTGTGTGCAAGTGTTTCCTCTGAATCAGTAAATATGACCGAACTATTACAATGGAATGAACTCTATGGCGAAGGTGGTTCAAGAGTAAAGAAATCT CTCAGCTATTTCATGTGAGGGCTGTTTCTTTGGTAGACACCTATTGCTGCCTCCATCTCGTAAGGCCCGAGCATATGTAGTTTTTTTTTGCCCATCAAAC GGGCTAGCAGGGGTTGTTGTTCAGCCATTTCCTTTGTAAAATGAAACCTTCTTTGAAGTTACTTTTCTTATGTCCCAGATGGTAAGTTTTGAAGGGAGTT GAGACTGGAGAGCCATACAGGATTTTGGTCATGTTCTTCTGCTTTTGTTTGGTTCCTCGTCCCAAAAGAACGCGGTTGAGTTTTTTTGTTGATCTTTTGA AAAGTTTTAAATGTCAGACCATAAGATAAAGATAACATTGTAGATGATCCCGTGCATATATTTGTTGTCACTCCTATTGAGATATGTTGGAATAATAAGC ATTTAGGCACTATCATTCTCTCTTTTATGTTCATATATCATGCGTTTTAAAGTCTCTAAATTGATCCCATGGGAATGCAAGCGATTGATGCGTTTTAGAG CGTTTATCTTTATGGTTGATTAAATACCTTCAATAGTAAGTGTTAACATTCCATATTTTAAATTCACACTATACTCCCCCTGCCTATAGGAATGGTGTTG GCTGCGTTAAATTGTAGATAGCTACTTCTGTGTATGGATGTATATTATGTAAATTTGACTTTGCACTAGTAATAATAGATGCCAC
• Tissue: pods
• Gene name: LI_gene_181029;
• Additional information: details;

Expression of Ll_transcript_386664

FPKM

• PAB: 15.9
• PNAB: 18.5
• PS1: 23.8
• PS2: 18.1
• PS3: 27.1
• PW1: 16
• PW2: 18
• PW3: 24.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_386664

• Blastp: Spastin from Gallus with 36.6% of identity
• Blastx: ATPase family AAA domain-containing protein 1-A from Danio with 50% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (421481)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_015956381.2)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;