| Id Trinity | TRINITY_DN50926_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_388192 |
| Sequence | CGGAGCTTCCGGCTGTGGCAGCGGAGCTTCCGGCTGTGGCAGCGGAGCTTCCGGCTGTGGCAGCGGAGCTTCCGGCTGTGGCAGCGAAGGTTCCGGCTGT GGCAGCCGTGTCTGCGGTCGTGACACCAGTAACAGAAGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGACCGGACGGCAAGGTGGCGGCAGTGGCA AGGGCGCTGTCACCCATGCCGATTTCGGCATCGATTCCATTGACCGGACAGTTGTCAGCTTGGAAAAGGGGTATAGGGAAGCCTGTTGAATATGCAGGAC AAGGACGATGACATAATCTGAACAAGGAAACATAGCTAAAATAATTGAGCTGGTCTGAAGTTTAAAAAAGAAAAGTGGCCTAGTGCATGATGCTTCCGGC TAGTGGGGTCTGGGATTAAATGAAGAGATTGTTTCCAAGAATTGATCTGAAGTGTAAACTAATAATTTTATTCAACAACTTGGTTTGGACCATAACATTT TGCAAAATATGGATCATTATTGAATTTTGCATATTTGAAATATGGTTAGTGTTATAGGACATATAATAACAAAGTCTGTAAGATGAATTCTTCCGTGCAG AATGTTAATATTGGCTTTATAGAATGCTTGTTTAATTTATTTATGATTCAATTGTTATTTTTTTTAAGTTCATGTTACTATTTAGAATGTCATATGATCG AGGGATTGTGTACTCTAGTGCAAACCATTTTTCACATATATCCACTTCAGGCCTTTGATCTTAGTCTCATCTAACTGTTATATGATTTAGCTTTAGCAAT AATTTACACTGTTGTCCGGAAACATCCTTCTTGCTTGTGAGGTTAAGGCTGTGTACATTTACCCTTCACTGACCCCACTAGGTGGGTCTTACTAAATGAA TTAATGGATTGTTTTTATATAATGAATTGATACTTGCACTTTAGTTGAGTTAGATATAACTTCTTCTCTGGCCTTACATTCTCTTATTCTGTCTTTGTTT ATTCATCTACATATCTTTGTATGTTATAGGAGATGGAATTGCATATTCTGTTGGTGCCAATTTCTCGACTTATGTGCTTACAGTAAATGCTGGCGAGGAT GTTACTATGAAGATTATGTCCTTCTCTCAACAGGGACACCGTGCTATATGCATTCTCTCTGCCAATGGCTTAATTTCAAATGTTACACTTCGTCAACCGA CTTCATCTGGTGGTACTTTAACATATGAGGGACAGTTTGAGATTGTTTCCCTGTCTGGTTCATTTATGCCAACCGAGAATGGATTGACAAAGAGCAGATC CGGTGGGATGAGTGTCTCTTTGGTTGGTCCAGATGGCCGTCTAATGGGTGGTGGACTTGCTGGTTTGCTCGTAGCCGCAGGCCCTGTGCAGGTTGTTGTG GCCAGTTTTCTTCCAAGTCAAGAGCTGGAGCATAAATCCAAGAAGCCAAGGATGGAGCATATATCAACAACTACCACTACACATGTTACTACAATTTCTG CTGAAGAAATAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_181054; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388192
| Blastp | AT-hook motif nuclear-localized protein 1 from Arabidopsis with 73.04% of identity |
|---|---|
| Blastx | AT-hook motif nuclear-localized protein 1 from Arabidopsis with 71.43% of identity |
| Eggnog | AT hook motif domain containing protein, expressed(ENOG410YFD3) |
| Kegg | Link to kegg annotations (AT4G12080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451022.1) |
| Pfam | Domain of unknown function (DUF296) (PF03479.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |