Id Trinity | TRINITY_DN50940_c1_g4_i9 |
---|---|
Name Transcript | Ll_transcript_386371 |
Sequence | CCGTAACCAATAGCCGCATTCAGAATCTTCTAATGTTCTTCTTCTTCTTCTTCTCCATTTTCTCCACTATTCTCTCTTTCTAACCCTCCCTCTCTCCAAT CATGGGAGAACTCTTCAAAATCAGTTCAATCGATTGGAAACCCTCGCCGGTCCTCGCCTTAGCCGCCAGCGTCGACGGTTTACGTGTCGCCGCCGCTCGC CAAGACGGCTCGCTTGAAATATGGCTCGTGTCGCCTGGCTCCATTGGTTGGCACTGTCAGTTAACCATTCATGGAGACGCTGATAAGCGAGTTTCGTCGC TGGTTTGGTGCACCGGTGCGGTGAATGATGAGGCGTGTGGTCGTTTATTTTCGTCTCATATTGATGGTTCTGTTACTAAGTGGGATCTTTTTCATTTGAA ACAAACGATGGTGCTAGATACCAATGGTGTCTCAATCTGGAAAATGGCTGTGACCCTCCCGAAGAGGGATGTAATAAATTCTGAAACACAAAACAATCAT GTTGGAAATGGATTCGTGAGTAAGTTTCACAGTTCTGATGAACACAACGAGAACAGTGAAAGTGATGAAGATTCTGACTCAACTGATACAATGAAACAGT CTGTTACTGAGTATCCACGTGTAGCTATTGCTTATGATGATGGATGTGTGCGGATTTATGCCATCTCTGATACAGATGATTTTATGTATGTAAAATCCTT GCCTCGGGTCAAAGGACGAGTTTTAAGTGTCACTTGGAGTGCAGATTCTAACCACATATATTCTGGCAGTAGTGATGGGCTAATACGATGCTGGGATGTT ATATCGGGCCATGAAGTCTATAGGATTACAGCTGGACTTGGAGGTTTGGGCAGTGGACATGATCTTTGTATATGGTCATTACTGTCCTTAAGGTCTGGGG CACTTGTTAGTGCAGACAGCAGTGGTACTGTTCAATTTTGGGACAGCCATCATGGGACTCTCTTGCAAGCTCATTCACTACACAAGGGAGATGTAAATGC TCTGGCGGCAGCACCTAGTCATGATAGGGTGTTTTCTGCTGGTTCTGATGGTCAGGTTTTCTTGTGAGTAAACAGTGTTGCAGCATTGGTTGAAGTTTCC GAAAAACCACTCATTATATTTGTTCTTCGAGATTGAGCCAAGTGGGTAACAGAATAGATACAATAACATTATTGAGCGAGGCAATTATGATAGGCACTGA TAGGATGAGCACACTCACTATTGTTGCTTTTGATATGTATAGATTTTACAGTCTGGTTTTTTCCCGTGCCTCTTTTTTCTGCCTTTAAACATATAGATTA TTCTACATATCCAATGTCTTCCCGGGTCCGTATCCTTTCTTTTCTATAAGAAAACTATCTTATCTGAATCTTGAGTTGTTTTGGTGGAAGTTCTTTTTCT ATATATCACATCATTATGTGTATGATTCTCTGTCTGCCCCATTTTCCTTAACCTACTAGCTAAGTGCATTATAATAATGCTGGTGTAGTTTATTTTATTT GAAGGTTATTCTTTATAAGCTGTCTAGTCAGCCAGCGTCATCTGACGGTGTCAATTCTCCGATAATGATGAAAAAGTGGATCTATGTTCAATGTATAAGG GCTCATACACATGATGTCAGGGCCTTGACTGTCGCTGTACCAATAACTCAAGAAGATGCTTTGCCAGATGAGAGGGTTAAACGAGCTCGACGTGAAGAAA AACCTGTTGAGTTTAGTTATCATAAGTGGGCTCATTTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACCAAACTCTTTGCATACCCTGTGAAAGA ATTTACTAAATTTTCTCCTCATGATATCTGTCCCGCTCCTCAAAGAACACCTATTCAACTAGTTCTTAATACTGCCTTCAATCAATCATCAATGCTTTTA GTGCAGTCTTCACATGGGTTAGATATCCATTTGCTACAACTCAGAAACATTCACACAGCTGGAGGCCGTGCAAAGACTGAAATGCTTGCCCGAGTCAAGA GTAAGGCATCTCAAAAGATAATTTGCAGCACCATTTCTAATTCAGGCATGCTTTTTGCATACTCCGACCATTTGAAGCCTAATCTCTTCGAATTGAAGAG GTCTGAAGGTGGGAAAGTTACATGGAGTGTCAGTAAAAGGAAACTTCCTTCCAGATTACCATTTGCTCATTCCATGATTTTTACTCATGACTCCTCTTGG TTGATAGTAGCTGGGCATGATAGAAGGATATATGTTGTGGATGTGGGAAGCGCAGAACTAGTTCATACCTTTACACCTTGTCGTGATTTGCAAGATGAAA AACTACCTCCAACGGAGCCTCCAATAACAAGATTGTTCAGCAGTTCTGATAAGCAGTGGCTGTCAGCTGTGAACTGCTTTGGGGATATATATGTATTTAA CTTGGAGATACTAAGGCAGCATTGGTTCATTTCACGATTAGATGGTGCCTCTGTTACTGCGGGTGGATTTCCGCCCCAGAACAGCAATGTAATGATAATT ACAACCTCCTCAAATCAAGTGTATGCATTTGACATAGAAGCCAAGGAGTTGGGAGAATGGTCAAAGCGTCACACTTATGTTCTTCCCAGGAGATACCAGG AATTTCCTGGTGAAGTTATTGGGCTTTCATTTCCTCCCTCATCGTCTTCATCTTCAGCTGTTGTTTATAGCTCCAGGGCAATGTGTTTGATTGACTTCGG GTTGCCTGTGGAGCAAGATGATAATGATATGCTAAATATTCAAGACCCAAGGGCCAAGAGTTCGCAAAATCTTGGTGTCAAGAGGAAGATTAAGCATAAG AACTTTAATGTTTTGCCATTAGAAAATCCAGTTTTATTTCTAGCCTACATGTCAAAAAATTCCTTCTTTATGATAGACAAACCTTGGTTGGAAGTTGTCA AAAGTTTAGAAGCCCCACCAGTCCACAGACATATTTTTGGGACATAAGACTATTGTTCTCAGCTCTAGGGTTGCATTGTGGGGTTAAGACTATTCTTTCA CTTCAGTTTTTACCTCTCCATGGCTGGGTTCCAGTATCATGTATTTTGTATTTTCATAATCAATTTTGTTCTATCAGTAATAGAGTTACATTAATTTTTT GGAAAATGATATATCCTCCTACTACâBLAST |
Tissue | pods |
Gene name | LI_gene_181185; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_386371
Blastp | U3 small nucleolar RNA-associated protein 4 homolog from Mus with 25.43% of identity |
---|---|
Blastx | U3 small nucleolar RNA-associated protein 4 homolog from Mus with 25.79% of identity |
Eggnog | cirrhosis, autosomal recessive 1A (cirhin)(ENOG410XQNR) |
Kegg | Link to kegg annotations (21771) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436965.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |