| Id Trinity | TRINITY_DN50943_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_387643 |
| Sequence | AGCTAATTGTGGGGGCAAAAGGGTTACTATCGGTCGGAGATAGGACAAAGATCTTTTGTCCTAAATTTTCTCTCAAACTCTATACTGAATCAATTAGAGT GTGACACATTACTTAAAATAAAGTGAAGAAACGAGGGAAAAGAAAAAGCATAGAAAAAGAAGAAACCCCGCTTAGAAGCTCCCAATTACAAGCTCTTCTG TGTTTTCTGAATCAATCATTCTTCAAAAAATTTATCTTTGATTACCACTTTCTTCAAACAAGTCAAAGAATCACATGGGTCGCGTCCTTCTCTTTCTCAT TATTATCAGCTTTGTTGCATTATCTTTACTCTCAGAGGTACAATCAACGTCGTTCAAGATCGTGAACAAGTGCCGCCACACGATATGGCCGGGACTACTC TCTGGCGCCACTTCACCGCCGCTCCCCACCACCGGCTTCGCTCTTAGCAGCGGCAAGTCCAAGACCATCAAAATCCCCAAATCTTGGTCGGGTCGGCTTT GGGCTCGGACCCTCTGCGGCCAAGGCTCCGATGGAAAATTCTCATGCGCCACCGCCGATTGCGGCTCCGGCAAAGTAGAGTGTGCTGGTGGCGGCGCCAA GCCGCCGGCAACACTGGCGGAGCTCACACTTAACGGTGCTGACGGGTTGGACTTCTACGACGTGAGTTTGGTTGACGGTTACAACCTTCCGATGCTGATC GTGGCGAAGGGAGGTACCAGGGGTGGGTGCAGCCCCACGGGGTGCTTGGTTGAGCTCAACGGCGCGTGCCCGAAGGACCTCAGGGTGGCGCGTGGGAATG GGACGAGAGAAAGTGTCGCGTGCAGGAGCGCGTGTGAGGCTTTTGGTGACCCAAGGTATTGCTGTAGTGAAGCTTACTCAACGCCTGACACGTGTGGTCC TTCTGTTTACTCGCAGTTCTTCAAATTTGCTTGCCCACGCGCATATAGCTATGCGTATGATGACAAGACTAGCACATACACGTGTGCTTCCGCTAACTAC TTGATAATATTTTGCCCCTTACCCTATACCAGCCAAAAACTGCTGGAAGCGCGGAAAGATGGAGCGCCGCTTCCCCTCGTAAACAAAACTATGATGTATT TATCAAGGCAACATTCAGGTGGTTCTTCATCAACAGGCAGATAGAGACATGAAAACTAGTTGGTTCTTAATTGTAGCCATGACTTCAAGGATATACCATA TAGGAGACACTGTAAATATTTTTCCTTTAAGTGTTGCCTCATTTCTCCCTTCTCTCCTTTAATATACTCCAGCACTTCAATAGAGTAGTATCTCTGGCAA TCCTTCAATTTTGATTTGCCAACAGAGATATTACCAAGTTGGTAACTATCCTGGAGTCAGATTTTGCAAGTTATGAGAGGGTTAAGAATGACATTGTGAA GTGTACAAGAGATAGCTTTATGATATGAAATCATGTTTGGTGCATAATTACTGCATTCAATATACTCAAAATGTGTGTTGCACAATTTGTTCAGGAAAAG GCATCAAGCAAATAATAGGAAACATTGGTATTTCATAAGCACCCCTGATGCAAAACTGCTTAGGACAAATACGCTTTAATTGAAGATGAAAAGCCATAAC AAGTGATTAACAGACAATGCCTATTACTTCTTCCATCAATTAATGAATATATACTTCACTGTACTCATCCATCAATTAATGAATATTCAGTTTATGCATT TCTCAACTTTGTTCTCATTCTCTGTAAATCTCTTCTTCATTGTTCTTATGCAATTCCCTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_181201; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_387643
| Blastp | Thaumatin-like protein 1a from Malus with 49.15% of identity |
|---|---|
| Blastx | Thaumatin-like protein 1 from Prunus with 48.19% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (103411735) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464886.1) |
| Pfam | Thaumatin family (PF00314.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |