Ll_transcript_387647

• Id Trinity: TRINITY_DN50943_c0_g1_i2
• Name Transcript: Ll_transcript_387647
• Sequence: AGCTAATTGTGGGGGCAAAAGGGTTACTATCGGTCGGAGATAGGACAAAGATCTTTTGTCCTAAATTTTCTCTCAAACTCTATACTGAATCAATTAGAGT GTGACACATTACTTAAAATAAAGTGAAGAAACGAGGGAAAAGAAAAAGCATAGAAAAAGAAGAAACCCCGCTTAGAAGCTCCCAATTACAAGCTCTTCTG TGTTTTCTGAATCAATCATTCTTCAAAAAATTTATCTTTGATTACCACTTTCTTCAAACAAGTCAAAGAATCACATGGGTCGCGTCCTTCTCTTTCTCAT TATTATCAGCTTTGTTGCATTATCTTTACTCTCAGAGGTACAATCAACGTCGTTCAAGATCGTGAACAAGTGCCGCCACACGATATGGCCGGGACTACTC TCTGGCGCCACTTCACCGCCGCTCCCCACCACCGGCTTCGCTCTTAGCAGCGGCAAGTCCAAGACCATCAAAATCCCCAAATCTTGGTCGGGTCGGCTTT GGGCTCGGACCCTCTGCGGCCAAGGCTCCGATGGAAAATTCTCATGCGCCACCGCCGATTGCGGCTCCGGCAAAGTAGAGTGTGCTGGTGGCGGCGCCAA GCCGCCGGCAACACTGGCGGAGCTCACACTTAACGGTGCTGACGGGTTGGACTTCTACGACGTGAGTTTGGTTGACGGTTACAACCTTCCGATGCTGATC GTGGCGAAGGGAGGTACCAGGGGTGGGTGCAGCCCCACGGGGTGCTTGGTTGAGCTCAACGGCGCGTGCCCGAAGGACCTCAGGGTGGCGCGTGGGAATG GGACGAGAGAAAGTGTCGCGTGCAGGAGCGCGTGTGAGGCTTTTGGTGACCCAAGGTATTGCTGTAGTGAAGCTTACTCAACGCCTGACACGTGTGGTCC TTCTGTTTACTCGCAGTTCTTCAAATTTGCTTGCCCACGCGCATATAGCTATGCGTATGATGACAAGACTAGCACATACACGTGTGCTTCCGCTAACTAC TTGATAATATTTTGCCCCTTACCCTATACCAGCCAAAAACTGCTGGAAGCGCGGAAAGATGGAGCGCCGCTTCCCCTCGTAAACAAAACTATGATGTATT TATCAAGGCAACATTCAGGTGGTTCTTCATCAACAGGTCTGATCCAAACACAAAGTATAGCTTATGTTGCCTCTATTGCAGTGGCTTATTTCTTATTCTT CCCTCCTTTACATCCTTAATGACTTTTGTTTGCTTGACACATCAGGCAGATAGAGACATGAAAACTAGTTGGTTCTTAATTGTAGCCATGTGAGATTCTC ATGATGTCTCACCTCTTGTCTATTTTTCATTAAACTATCAAATGGCTATGCTGATTCTACTGATGATGCAGGACTTCAAGGATATACCATATAGGAGACA CTGTAAATATTTTTCCTTTAAGTGTTGCCTCATTTCTCCCTTCTCTCCTTTAATATACTCCAGCACTTCAATAGAGTAGTATCTCTGGCAATCCTTCAAT TTTGATTTGCCAACAGAGATATTACCAAGTTGGTAACTATCCTGGAGTCAGATTTTGCAAGTTATGAGAGGGTTAAGAATGACATTGTGAAGTGTACAAG AGATAGCTTTATGATATGAAATCATGTTTGGTGCATAATTACTGCATTCAATATACTCAAAATGTGTGTTGCACAATTTGTTCAGGAAAAGGCATCAAGC AAATAATAGGAAACATTGGTATTTCATAAGCACCCCTGATGCAAAACTGCTTAGGACAAATACGCTTTAATTGAAGATGAAAAGCCATAACAAGTGATTA ACAGACAATGCCTATTACTTCTTCCATCAATTAATGAATATATACTTCACTGTACTCATCCATCAATTAATGAATATTCAGTTTATGCATTTCTCAACTT TGTTCTCATTCTCTGTAAATCTCTTCTTCATTGTTCTTATGCAATTCCCTG
• Tissue: pods
• Gene name: LI_gene_181201;
• Additional information: details;

Expression of Ll_transcript_387647

FPKM

• PAB: 9.5
• PNAB: 5.2
• PS1: 1.3
• PS2: 1.1
• PS3: 1.4
• PW1: 1.6
• PW2: 3.5
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_387647

• Blastp: Thaumatin-like protein 1a from Malus with 49.15% of identity
• Blastx: Thaumatin-like protein 1a from Malus with 49.15% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (103411735)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464886.1)
• Pfam: Thaumatin family (PF00314.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;