| Id Trinity | TRINITY_DN50946_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_388148 |
| Sequence | CCCAGTTGATTTATCTTGTGTGACTGCAACCTCAGCATAACACTTTCTCTCTCTAAAATTTACAAGTGAAGGAGGCTGTGGCACCTTCCATTCCAGAAAG GGAGAGAGAGCTGTGTTTATAAGTGAATGCTGTAGACTTGTCACTTGTGTTCGGGGACGCTATTGCCAGTTGCATTAGTATAAGAAGCTAAATATCGTTG TCTATTTCAGAATGGGTGCTGCTTGTTGTGTTGCAGCCAAAGATAAAACTGTACAAGGTGGATCTACCCGTGAAATCTTACATCGTAATGTTCGTTGTTC TCCAACATGGAGCTTCCGGTGGGATCATCCAGGTCGTGTAGCTGGTGAAGATGCTTCTATAACTTGGGTTTCTGATGGTATTAGCAGGAACGATGGATCG GAAAATAAAAATGAATCATCATATGTATCAGAGGATGGAAGTCCATTGCAGAGTGATCAAAGGAATATATGCCAAAAATACCCGATTTCTGAAGAAAGTG TTGGACATGCAATAAATTCTACTTCAGGTAACTTTCATTGATTCAGCATTCTGGTTTTAACCATGTACCTACTTGGGTTGGAACTTTTTTATTTGGATTT TTTGTCATTCACTTCATTTCCCTGATATTTACCATCTGATATGAGACAAATGAGGAACCTAGTATTAAATAGAACAAAACCTAAGTAGTCAATCCCTAAT AGTAGTCCAGCTGACCCCAGATGGATGGAATCTATTAGGAGATGACCACGAATTCCACTCAGTTGTAGAAGAAGAATGCCGTGTCTTTGAGACATTGATT CCTTGTGCCACTAAGAAGGAGGATCCAGAACAGATGTGGTCTCTGCAATGAATTCGGCGAGGATGAAAGAAAAGAACGAAGCAGAAGAAGTTCGAAAAAA TAAATAGAGGAAGGAAAAACAAATTAACCAGTAGAAGGTCTGGGTGGAAGAGTAATAGTAATGGTTAAATAGAGATTTATTGAGTCTAAGTGAGGGTAAA GAAGACATTTAAAAATATTAAGAAGAGTCGCCGAGTTAAAGAGGGTAAAATAGAACATTGACAAGTGAGGGTGAATTTGTAAAAATAAAAGCAAGGAACA TGAAATGTGAAAATTAAAACCCTAATCCAATCGGGAAAGAAGACTGCTGCTGCCAGGAAGAATTAACCCCAACCACTATATGCTGTCACAGCCACTATAG GGTGTAACTCTCGCTGTGTGGGGAACCTATAATTGACATCGTTATTCCGCTATAGCATGCAATAGCACTGCTATTGACTACCTAGAGTGAAACATAATAA CAAGCCAATTTGAAAGATATAATATTATTCCTTCTGCTACATTAAATTTGGAAACATGATGTCTTCTCACATGTTTCTTTTTCTTTAGCTTTCAGAATTT AAACACAAGAAAAATTGAAAATTAGTGATAAATATGGTTAGAATTTGGAGTAATAATTCCATAAATGGAACAAATTAATTTTTATCACATTATCGCACTT ACCAATTCCAGAGATAATTAGATGATAATTTTGAATATGGTAGACAAACTCTAATCAAGCGGGCTTGTTTGTCCTAAACCTTTGGGATCACAATACAATT TTCTCTTGGAGATACTAAAATATTGAAAACACTGTTGTAAAGTATCTCTGCTTATGCTCCCAATCAAATAATAGTTGTGGCTCTTTATTTGTAATCCTTC TGTGGTTTAGAAAAATTAGACCATCAGGACATCAATATGTTTGATAAGTTTTCTACGTTCTTAGTTCTTACAGATATTTTATTCCCATTTCTTCTGGAAG CTCAACCAAACAATATAATTTTTCCCTCTATCCTGCATTCTGTCTTAAAATTGGTGAATCGGTAGAAAAGGCGGGATATATAGTACTTAGTAGAGCTTAG TTAGATATTATCATCCAAAAAGTTCAAGATTCTACAAGTGTTTTGATGTTCCTTACTTCCTGCATCTACTCTGTGCATATTGTAGCACGATGCACGTTAT TTGAACATGTAATGTTCTCCATTCTTAAATTAACAGTGCCCCGAATTTTCTAATTTCTCTATCAGTTGCACTGCACCCTATTGGTTTTCCATTGCTGTAT ACAAAGCAATAACTGCCCTTAGCCCTATGCCTCTTATCTTGAATATAAAACTCAACAGAATATTTCGTGAAAGTCTGTTTCAAGTCAAGTGGAATAGAAA GGTTTGCCTCTTTGTTTGAATAGATTATTGAATCTTTTTGTTGACTTTTGGCATTTGATATGGAGATAGTTGTATTTTTTAGTGTTGAATGGTTCATTGC GGTCCAGTATGTGGTTCTTTAAACATAAAAGAAAATCCTCTAAAACATGGTCATGGAAGTTTCGCTTATAAACACACAATCTTGGAGATGGTCTAGATGA GACTTTTTTGTGATAACTACAAGTTTAGGGTGACAAGAGGCTCTCCCCATTCAAAGCTCACCAACCTCAGGTATGATTTTACAGTGGCATTACAGATCGC TTAACAATGAGGATCCCTGGATGAAGACTTCAGTGTTGGTTGTTTTATAGATCTGCAAGTTGTGTACCTTGCATGAGGGCTAACCAATGACTATATATTG TGAAGCTAGATTCATATGAATTGTTTCTGCATAGGTGCATCCTGTGTGCCCATGCGTCACATTATCCTGCTGTTTGCAATATGTAAACTGATCCTGTTTT TGATGCCGTGGTAAATTATTATTCACTCAACTGCTTGATTTATAGTATCTCACATGTTTGTTTCAGATCAATCTATTTCTACTAATGTCTCAATGGATGT GAATGTGGAACAGGTGAGGTTATAATAGTGGAGGAATCTAGTCTTGTTTTATGTTTTTGCTAGTTCTTGATGTGTGATTTCTTTGACACGCTTCCTACTT ATTAATCTCTTTGAAGGTGAAGGGGATAGAAGAATCATCAACAGTATCGTGTCCATCGACAAAACTGTCATCCTCATTACCTTCTACTTCACTGTCGGCA TCTCCTTTGCCATCTCAAAGTCACCTAGCTCCCTCCAGCTCAACCCCATCAAGGTGGTCCTACCATTCCCCTGGAGACCAACTATTACGGCAAGTGTCTG ACAGCCAAGTCCCAGGATTCAAGTCACCAAAATGCTTCTATGTGACTGCAGAAAGGCCGGTGCTTCCTTCATGGAGCAACGAATCGGGTATGCGCTCTTG TGATGGATCTTCAGATGGTTGGTCTGTGCCTGGCTTATCTGAGCTGATGGGAACTTCCAATAAAGAAAGATGGTCTTTTGATAGTGAATCTTTTGGTTTT AATCGGGAAAGGTTACTTAGATCAAGTAGTCGGTTTTCAACATCTCCAGTTGATTTGCAAACATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAGTCTT CTTGGAGCTCCCAAAAGATAATTGTTGCAAGTAATGACCTTGCTGTAGTTTCTGTTCTTATTTGTGGCCATGTCTATCATGCTGAATGTTTGGAGAGTAT GACACCTGAAATCAGCAAGTATGATCCAGCTTGTCCAGTTTGCACTTTTGGTGAGAAACAAACTCTGAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATG GATTTAAAGGCTAGAAACAAGAAATCGAAGAACCAAATTGTGGACAGTGAAATAGATGATTTTGTTTTTGATCGCTTTAAAGATGGAGGGCGTCAAGGTA AAGGTCATAGGATGGGTTCTAGTTCCACTGGGAGAAGATTCTTTGGGAAACCATTTCTGAGGAGACACTTCTCACTTGGCTCAAACAGTTCCAAATCCAT GTTACATAATCACCCTACAAAAAAGAAGGGATTCTTTTGGGGGAAATCTAGCAAGCAATAAGCTGCTTCTTGGTTGCTGGGAGGTTCCATTATCTCAGAT AAATGACTGAAGAAAGGGCATGGTGTCATTCATCAAGCTTAGATTTTTTAGCATCTCCATAGACCAGACCTTGATTTCAACAGGACTAGAAGCTGGAGTT ACTCTGTAAAGAAGAAAAGTGTAAAACATACAGAAGGATATGAAGAAGACATAGTGTTTTAAGAACAAGGGTCTTTTTTATTTTGTACAGATCAATTTGT TTATTACATGGATTTAATTCATGTACACAAATGATGTTCTGTTGTCTATGGTTCTGCTGATATGTATTACATTATACATATACATGCCATTAGCCCTTAG GAGTTCTTGGCTGTTTGGGCAATCGTCTTCACAGATTGTAAGGCAATACCAATTATTTTGGTTGACTTAACTTGTTTTTAGTGAAAGAATAGTTTCAGAA GAACCCTAGTCAAATAATTGCCTTTGTTTGTAGAAATATATGTTTATGGTCTTTGTTGGTAGAAGATTGAATTATAAGCTTTTTCATGCATGGCTTGTAC TGCCAAAGTGTTCATTTTGTTGCTTGTTCAATGTATGTTGAATCACCAAGCCTTAAAAGTTCAAATATATTCTTAAATTGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_181219; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_388148
| Blastp | - |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453440.1) |
| Pfam | RING-type zinc-finger (PF13445.5) |
| Rfam | - |
| GO | - |