Id Trinity | TRINITY_DN50951_c1_g1_i9 |
---|---|
Name Transcript | Ll_transcript_386980 |
Sequence | AAAAGAACTTACTCTTGGAGTAAGTTGGTCTCTTCCCTTGTATTTGTGAGTTGAGTCTTAGAGATGAAGAGAGGAAAAATGAAAGCTAGAAAGTCATAAA ATACATTTGTGACACTATTTCTTGAGTATGACTCTTCTCCATTAATGGAGAGGCAAGTGTTTTGAAAAAACAAATGAAATGTAACATACAATGACATTTA TATCTCTTTCATTTAAAATAAGATTATTCTTTTAGCCTTAAAATACAAAGAAAAAAATAACTTACCTCTCCATTAATGGAGATGACCCCTATTAAGTTTT AGCAATGTTTTTATAGAAAATGATAAAAGAAGACACATGTTATGATTTTACTGACTTATTACTTTATTCTCTTCAGAAAATTGATGTAACAACTATATAT AGATAGTGGCATCGTGTCTTATATAGTTTTTTCCATGTATGAAAAAGACTGATAAGGAGAGTAGATAAAGTGAAAGGTAGTTTAACAGTTAGAGTTATAA GAGACAGAGAAAAATTATAAATGAAGTAGTTTATAAGGATTTAGAGGTGAGTTGGTTGTCAATAGATATGCTTATCATAAGACCATGCTTATTATAAAAT GGATTGGTTGCTGTTGGATGTTGGGTCTTTGGCTTTAACATTTAGAGTAATTAAATATACCTTGAGATGACTGTCAAGTTAAGTCTTTTCTTTCTCTTCA TTTCCCTCCAAAATTCAACTCGTACCCTCATCCTTAGGGTCGGCTTGAAAGTTGAATTTTAGAGGGGAATAAAGGAAAACAAAAGGCTTGAAGCGCTTTC ACCAGTGTATGCCTTCCTCTCCCCTCTATTGTATTCCAGAAAAACCAACTCGTAAACAGATTCTACTGATTTTCTCGCAACTTTGCAAACTCTAGTTTCT AATACAATTGTTATTATGCTTCAAAATTTATAGTTTATGTTACATGGGTATAAAATATTGTAATACAGAGGCTGCGTTCATCTTTCTTGTCCCAGTTTTG GACAATGTTTTACTTACACCTAGAGTAACAAACCTCTACAATTCTATTTATTTGTATCCATGTGTGTGCACACGTTTTTTTTGTTGCCTAAATCTTTCAG ATTCATCATGTTGCTTAACTTCAATTCATACTTCTCTTTGCAATGTTTACTAACAGTTGACTGTTTTTGACCAAAAAGAACTGAAGATTGAGTCCTCTAT ACACAGTTGCACACTTTTCCTTCATACCTTGCATAGTGTATTGAATTTGAGTTCCTAATGTTTAAAGGCTTTATTGCTTACTTTGATATTGGTGGGATTC CATTAATTCGAGATGTCAATATATACATCTCGTTAGCCTTTAGAGGCTGAAAGATTTTGGATATTACATGTATTTTGATGTGGGGAAGACAATTATAATG TCAAAACTAAGGGTGTTAAATTATTTTTATTTTATATTATTGTTGATTATCATGTGATAACAACCTGGAAACAACTTATTCGCTTGCGGAAGTAAGACTG TGTACATCAATCCTCCACAGGTCCACTGAGTGAGTGAGAGACTGAGAGCCTTCGGCACTGGGTTGCCCTTTATCATGTGATAACAAACATATCATATCAT GTTCACATTTCCTGAATTTTTTGGTTACTTTGTCAATTTTAATTCAATTATATCATTCCTTTGTTCTTTAATTTCTTTCTTCTAAGTTAACCGTACCAGC TCAATATTCGTTCATTTCGATTTCTGAAATATTTTTCATGATATTGCCTGCTTCTGCTTGTGCTTTTCAGTTGTCATGGGTAAACCTGTCAAGGAATTTA TTATTAGCATATCAAAGCCTTGGTGTGGTATATGGAGATCTGAGCACATCGCCTCTCTATGTTTATACAAGCACATTTAAAGGAAAGTTGCAGAACAACC ATGATGAAGAAACTATTTTTGGGGCATTTTCATTGATTTTCTGGACCCTTACATTAATACCTTTGCTTAAATATGTATTCATTCTATTGAGTGCTGATGA TAATGGTGAAGGTGGGACATTTGCTCTGTATTCATTGCTCTGTAGGCATGCCAAGTTTAATTTGCTCCCTAGTCAACAAGCAGCCGACGAGGAATTATCG TCCTACAAATATGGTCCCTCGTCGCAGGTCGTAGCCTCGTCTCCACTGAAGAGGTTTTTGGAGAAGCACAAAAGGTTAAGAACAGTCCTACTTGTTGTGG TATTGTTTGGTGCTTGCATGGTCATAGGTGATGGTGTTCTTACTCCCGCAATTTCGGTTCTAGCATCAGTATCTGGTCTACAAAATACAGAAGCAAAATT GACTCATGGTGAACTTGTCCTTATAGCCTGTACCATATTGGTTGGTCTGTTTGCACTCCAACATTATGGCACACAAAAAGTTGCATTTGTGTTTGCACCA ATTGTGATTATCTGGCTTGTATCCATTTTTTCTGTTGGACTCTATAATACAATATATTGGAATCCGAAAATAGTTTGTGCTATATCGCCGCACTATATCA TCAAGTTCTTTATTAAGACTGGTAAAGAAGGTTGGATTTCTCTTGGAGGGATACTTCTCTGTATCACTGGAACGGAAGCTATGTTTGCGGATCTTGGTCA TTTCACTGCTTTGTCAATAAGGCTTGCATTTACCATTGTCATATACCCTTGTTTGGTAGTACAGTATATGGGCCAAGCAGCTTTCTTGTCCAAAAACCTG AACTCTGTTCATAATAGTTTTTATGAGTCAATACCTGGAGCTATATTTTGGCCTGTCTTTGTTATTGCCACCCTTGCAGCTATTGTTGGGAGTCAAGCTG CTATTACTGCCACTTTCTCCATCATCAAGCAGTGTCACGCACTTGGTTGCTTCCCACGAGTCAAAATTGTACACACCTCAAAACATATGTTTGGGCAGAT CTACATCCCAGAAATAAACTGGATACTCATGATTCTGACTCTTGCTGTAACCATTGGATTTCAAGACACTACCTTAATTGGAAATGCCTATGGTAGTGTA TTTACTTTTGAAACACATAACACATACTCCCTCCCTCCCTCCACTCTCTCATGCTTGTGCTAGTTTGCCTGGTAAATCCTACTTCAAATATCAATGCGCA CTACAAGTGCCCAAGCTTCTAATCTGAGCATTTTGCCCTTTTAGATCCGAGATAACGAACATGATATTTGTGTTTCGATAAAGCATTGAAGAGTGGGTTT TTCTTTGAATTGCATTAGAAAGGCAGCCCTCTTAATTTATCTCATCCAAGTTAAGTTTTTTGTGTATTTGGTTTGCAGGACTTGCTTGTATGACAGTTAT GTTTGTGACAACATTTTTGATGGCGCTGGTCATTATCTTTGTCTGGCAGAAAAGCATCCTGATTGCTACAATGTTCTTTTTATTCTTTTGGTTGATAGAG GGAGTATATCTATCTGCAGCTTTCATAAAAGTACATCAAGGAGGATGGGTTCCTCTTGTCTTATCATTCTTCTTTATGATTATCATGTATGTATGGCATT ACGGGACTCGCAGGAAGTACAGCTATGATCTACGCAACAAAGTTTCATTAAAATGGCTAATAGGTTTGGGCCCTAGCCTTGGCATTGTCCGCGTCCCGGG GATTGGTCTGATCTACTCAGAACTGGCAACAGGAGTACCTGCAATATTTTCCCACTTTGTAACTAACCTCCCTGCATTTCACAAGGTGATGATTTTCGTG TGCGTAAAATCGGTTCCTGTTCCACATGTCCCGCCCGAGGAGCGTTTCCTGATTGGGCGAGTTTGTCCCAGAGCATATCGGATGTATAGGTGCATCATAA GATATGGGTACAAGGATATTCAAAGGGATGATGGGGAATTTGAGAACCAACTCATACAGAGTTTAGCAGAATTTATTCAGATGGAAGCAGTGGAACAACC ACAATTCTCAAGTTCTGAAACTTCACATGATGGGAGGATGGCTGTTTTAAGTACTAGAAGCTTAGAATCAACTCCAAGCTTAATAGTGTCCGAGCACGAC GATTTTGATTTGGATGAGAACATCCCTAGCAGCAGATCTATGACCCTACGACATTTGCAATCCACTTACGATGATGACAACACACAAGTAAGAAGACGTC GAGTAAGATTTCAGCTACCTAACAATCCCGGGTTGAATCAAGCTGCTAGGGAAGAGCTTTTAGATCTAATTGAAGCTAAGGAGGCTGGTGTTGCATATAT AATGGGGCACTCATATGTGAAGGCAAGGAAGTCATCTTCATTCTTGAAGAAGTTCGTCATCGATATTGGTTACTCGTTTCTTCGGAAGAACTGCAGGAGT CCAGCTGTGTCTCTTAACATTCCACACATCAGTCTTATTGAAGTTGGAATGATATATTATGTCTAAGTTGTTAAGTTTCATAATTTGATCTCCTTGCATT TATTTTTTTGGGTTTTGAAACACATGCTCGACCTGGGTATGGCAGGTAGAGCTTTCACTTTGAGTATATAATGTAGTTGTATACCTGATACTCGAACTCG AGACATGTGATTAAGTTAGATCCCACACGCTTAGTGATCTCTAGCAACAACATGCACAAGCTCTTCAACATAAGAAACCAAGAATTTTATTGCACAATGA GAAAGCAAGAGAAAATCAATGGTTC BLAST |
Tissue | pods |
Gene name | LI_gene_181248; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_386980
Blastp | Potassium transporter 4 from Arabidopsis with 78.48% of identity |
---|---|
Blastx | Potassium transporter 4 from Arabidopsis with 78.48% of identity |
Eggnog | Transport of potassium into the cell (By similarity)(COG3158) |
Kegg | Link to kegg annotations (AT3G02050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428335.1) |
Pfam | K+ potassium transporter (PF02705.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |