Ll_transcript_388163

• Id Trinity: TRINITY_DN50952_c1_g1_i2
• Name Transcript: Ll_transcript_388163
• Sequence: TTTCCAATCAAACTAAAAACCTTATTTATTTTATAAATTTGTATTTACATTTGAAGTCGAGTAAATGACAAGCCCAATCCAATCAATCATTTGGGAATTG AGAAGAGAAAGAAAAAGGGAAGAGAGAAAGAGAGAAGAAAAAAGAAACTACACAAAAACGGAGAAGTTGAGTGTAACAGTGAACATCGATGGATGAGAGA GTAATAGAAACCGAAACCGAACTATTTATGTTTGGCTTCGACGGTGTTTTATTCCGGTGATCGGAAATGTTGATTTTCCGGCAACTGTTGTCGGTGGGAG TTGACTGAAGAATAATCAATACAGTGATGAAGAAAGGGAAAAGTAAAAACAACGGTTTATTGCCAAGTTCGTTGAGGATTATCTCTTCATGCATCAAAAC CGTTTCCACCAATGTCTCCACCGTCGCCTCCTCCGTTCGCTCCTCCGCCGCTTCCATTACCTCTGCTCCCGATGATCACAAAGACCAGGTTACCTGGGCT GCTTTCGATATACTAGAGCTTCATCAGTCTAACTTTAAACGTATTCTTTTACTTGGTTATCTCAACGGATTTCAAGTTCTTGATGTCCACGATGCTTCTA GCTTTATTGAGCTGGTTTCGAAGCGTGATGGTCCGGTTTATTTCTTACAGATGCAGCCTTTTCCTGTATGCTCTGATGGCCAGGAAGGGTTCATAAAATC CCATCCTTTACTGCTGGTTGTTGCCGGGGATGATACCGGCATTATTAATCACAAAGGTACCCATTCCAGTGCTTTAGGAAGGGGTGGTAAGGTGGAAAAT CAGTCTGGGAACAGTGTCAACTCTGCTACAGCTGTTCGGTTTTACTCATTGAAGTCTCACAGTTATGTTCATGTTCTGAGATTTCGGTCTGCGGTGTGTA TGATCAGATGCAGTTCACAGATTGTAGCTGTTGCTCTTGCCACACAAATATACTGCTTTGATGCGTTAACTCTTGAGAATAAATTCAGTGTTCTCACCAA CCCTGTTCCTCAGTTAGCAGTCCAAGGATCATTAGGTGTTAATGTGGGTTATGGTCCTATGGCTGTGGGTCCAAGGTGGCTAGCATATGCTTCCAACAAT CCACTGCCCTCAAACGTAGGATGCATGAGCCCACAAAACCTAAGTCCTTCGCCAGGAGTTAGTCCATCTACATCTCCAGGCAGTGGTAGTTTGGTGGCTC GTTATGCAATGGAGTCCAGTAAAAGTTTGGCTGCTGGGATAATCAAATACTGTCATGAGCTACTCCCTGATGGTTCTAATTCTCCAGTACCATCAAATTT GGGTTGGAAAGTTGGGAGGGTTACAGGAGCTGATAAGGATAATGCAGGAATGGTAGTTGTTAAGGATTTTGTTTCCAAAGCAATCATCTCACAATTTAAA GCTCATTCTGGTCCTATATCCGCCCTATGTTTTGACCCTAGTGGGACCCTTCTGGTCACTGCATCAGTCTATGGGAATAACATTAACATCTTTCGGATAA TGCCATCATGCACACGCAAGGGTTCAGGGGTTCCAGGCTATGACTGGACCTCTTCTCATGTGCATCTTTATAGGCTTCATCGTGGAATAACACCCGCAAT GATCCAGGACATTTGTTTCAGTCAGTTCAGTCAATGGATTGCAATTGTTTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTCACCTTTTGGAGGTGAT ACTGGTTTCAAAATCATTAATTCTCAGGGTGAAGAACCCTCCTTACTTCCGGTTTTTCCTCTACCTTGGTGGTTTATGTCATCTTCCACTTCTTATGAGC ATCCTTCGCCTCCTCCAGCACCTAGTGTCCTTTCTGTGGTTAGTCGGATAAAATATAGCAGTTTTGGATGGCTTAATACTGTTCATAGTTCTACTTCGAA TGTCACAGGAAAAGTTTTTGTTCCTTCTGGTGCTATTGCAGCTGTTTTTCATAATTCTTTATCTCACTCAAAGCAGCTTGGTAACTCAAAAGTGAAACCA TTAGAGCATCTGATGGTATATACACCGTCAGGTCATGTAGTTCAACATCAACTTCTGCCATCTGTTGGTCCAGAACCAAGTGAATGTGGTTTGAGAACCC AGTCAGCTTCAAACCTGCATATGCAAGAGGATGAATTCAGAGTAAAAGTTGAACCAATTCAGTGGTGGGATGTATGCAGAAGGTCAGAATGGCCAGAAAA ATGGGATCCTTGTGGCAATACTGTTGATAGACAAGATGGTATTGTTCAAGAGAAAATGTGTTCTGCTGATGGCTATGGATTGGATTTTTGGGATATAAGT CGTGGTGTTGGGGAAAAAGTGGTAAAGCATTCTACAGGGAAGCCTCAAGATAGATTTCATGGGTATCTATCTAATGCAGAGGTGCAAGTGAATTTTGGAA GGCTGCAAATATGGCAAAAGCCTAAGATTTACTTCTATGCAATGAATTCTGTGAGAACTGGTTTTAGTGATGGTGGAGAGTTTGAAATCGAAAAGATCTC TGCTAATAAAGTTGAAATAAGACAGAAGGAGTTGTTGCCTGTCTTTGACCATTTTCATAGCATCAGACCAAGCTGGAATGACAGAGACCATGCTGGGGAA AAATATTTGAACCTTGCATCTCCGGTTTCCTATCAAGCTGAAGGCAGGCAAACTGCTGACATGACAGTTATTTGTCACTCAAAGCCAGCATCCCTGAGTT CCACTGAAAGCTCTGATGGAGGTTCATCAAGAAGGATCGAAAATTTGATTGACCTGGATCAAATTTCTCCTACTTGTCAAGTATTTGGTGAGATCTACCT AGAAAGAATGGGGGCAATCAATGTTGAACCTTCGCTGCAAAACAAGGCTGTGCTGGAAAATTTATCTCTATCTGGGAACCTGAAACATGAGGATTCTCAA TATGACTATTGTCTTGATAACAGACCATTATTGCAAGGGAGCAAGATAACTTATTTAAAGGGAGATACTTCAGAAGATGTTGGTATCAGTGAGGCCTCAA CATTTGTCCTGAAACATGCTTCAGATAAGAGTGAGCCTATAGAAGTGATCCCAGTAATGCAAAATGCATGTGATAGTCAATCATTTCCGGATAGGCAGTG CAAAACACCGAGGCACAAGGGAGGTAACGTGTTAACTGAAGTAGTAGCTGATGATGTTGACAGCAGCAGTAGCCACCATGAAATAGAGCAACCAGAGGAG GACGGGGAGAATGATGAATTCCTTGGTGGCTTGTTCGCCTTTTCTGAATAAGGAGTAAAGAGCAGGTGACAGCATCAATGAAGGTGTGTGATCATCTTTG GTAGCTGGAGTCTCAGTTAGGAATATGTACAAAGCAATATGTGAATAAGAAATGATAAAAGAGCAACATATTAGGCTGATTTGTTGCTATATCATGTGAC CTCTCTCTCTCTCTCACTTTTGTACATTTTGTAAATAGGAAATCATATTCTATTCACGGGTTTGCTTACATTGGGGCTTATCATCTATATGTTGGGTTTG GATTCCTCCTAAGCTCATTTTTTTAATCAATCTTGCATCTTAATTGTGGATTGGGTATGGCATGGTATTTGTGTAATGCATATTTTTTAACACTTGAATT TGGCAAGGAAAATATGAATGGAAGTTGTAAAAGGTCAGTTAAATTTTCATCATGTTTTACTT
• Tissue: pods
• Gene name: LI_gene_181253;
• Additional information: details;

Expression of Ll_transcript_388163

FPKM

• PAB: 23.2
• PNAB: 7.3
• PS1: 6.2
• PS2: 4.3
• PS3: 6.2
• PW1: 7.4
• PW2: 10.3
• PW3: 10

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388163

• Blastp: Autophagy-related protein 18g from Arabidopsis with 57.62% of identity
• Blastx: Autophagy-related protein 18g from Arabidopsis with 57.55% of identity
• Eggnog: Breast carcinoma amplified sequence(ENOG410XSW7)
• Kegg: Link to kegg annotations (AT1G03380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441802.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;