Ll_transcript_388174

• Id Trinity: TRINITY_DN50952_c1_g1_i6
• Name Transcript: Ll_transcript_388174
• Sequence: TTTCCAATCAAACTAAAAACCTTATTTATTTTATAAATTTGTATTTACATTTGAAGTCGAGTAAATGACAAGCCCAATCCAATCAATCATTTGGGAATTG AGAAGAGAAAGAAAAAGGGAAGAGAGAAAGAGAGAAGAAAAAAGAAACTACACAAAAACGGAGAAGTTGAGTGTAACAGTGAACATCGATGGATGAGAGA GTAATAGAAACCGAAACCGAACTATTTATGTTTGGCTTCGACGGTGTTTTATTCCGGTGATCGGAAATGTTGATTTTCCGGCAACTGTTGTCGGTGGGAG TTGACTGAAGAATAATCAATACAGTGATGAAGAAAGGGAAAAGTAAAAACAACGGTTTATTGCCAAGTTCGTTGAGGATTATCTCTTCATGCATCAAAAC CGTTTCCACCAATGTCTCCACCGTCGCCTCCTCCGTTCGCTCCTCCGCCGCTTCCATTACCTCTGCTCCCGATGATCACAAAGACCAGGTTACCTGGGCT GCTTTCGATATACTAGAGCTTCATCAGTCTAACTTTAAACGTATTCTTTTACTTGGTTATCTCAACGGATTTCAAGTTCTTGATGTCCACGATGCTTCTA GCTTTATTGAGCTGGTTTCGAAGCGTGATGGTCCGGTTTATTTCTTACAGATGCAGCCTTTTCCTGTATGCTCTGATGGCCAGGAAGGGTTCATAAAATC CCATCCTTTACTGCTGGTTGTTGCCGGGGATGATACCGGCATTATTAATCACAAAGGTACCCATTCCAGTGCTTTAGGAAGGGGTGGTAAGGTGGAAAAT CAGTCTGGGAACAGTGTCAACTCTGCTACAGCTGTTCGGTTTTACTCATTGAAGTCTCACAGTTATGTTCATGTTCTGAGATTTCGGTCTGCGGTGTGTA TGATCAGATGCAGTTCACAGATTGTAGCTGTTGCTCTTGCCACACAAATATACTGCTTTGATGCGTTAACTCTTGAGAATAAATTCAGTGTTCTCACCAA CCCTGTTCCTCAGTTAGCAGTCCAAGGATCATTAGGTGTTAATGTGGGTTATGGTCCTATGGCTGTGGGTCCAAGGTGGCTAGCATATGCTTCCAACAAT CCACTGCCCTCAAACGTAGGATGCATGAGCCCACAAAACCTAAGTCCTTCGCCAGGAGTTAGTCCATCTACATCTCCAGGCAGTGGTAGTTTGGTGGCTC GTTATGCAATGGAGTCCAGTAAAAGTTTGGCTGCTGGGATAATCAAATACTGTCATGAGCTACTCCCTGATGGTTCTAATTCTCCAGTACCATCAAATTT GGGTTGGAAAGTTGGGAGGGTTACAGGAGCTGATAAGGATAATGCAGGAATGGTTGGTATTGTTTCACCATGCTCAGCTAATTGAGAAGTTAGAAATATG TACACACTTTAGGTGAGAGAGAGAATATTAATCTCTGACGTATTCTTAGTTCATATGATTTATTGCAGGTAGTTGTTAAGGATTTTGTTTCCAAAGCAAT CATCTCACAATTTAAAGCTCATTCTGGTCCTATATCCGCCCTATGTTTTGACCCTAGTGGGACCCTTCTGGTCACTGCATCAGTCTATGGGAATAACATT AACATCTTTCGGATAATGCCATCATGCACACGCAAGGGTTCAGGGGTTCCAGGCTATGACTGGACCTCTTCTCATGTGCATCTTTATAGGCTTCATCGTG GAATAACACCCGCAATGATCCAGGACATTTGTTTCAGTCAGTTCAGTCAATGGATTGCAATTGTTTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTC ACCTTTTGGAGGTGATACTGGTTTCAAAATCATTAATTCTCAGGGTGAAGAACCCTCCTTACTTCCGGTTTTTCCTCTACCTTGGTGGTTTATGTCATCT TCCACTTCTTATGAGCATCCTTCGCCTCCTCCAGCACCTAGTGTCCTTTCTGTGGTTAGTCGGATAAAATATAGCAGTTTTGGATGGCTTAATACTGTTC ATAGTTCTACTTCGAATGTCACAGGAAAAGTTTTTGTTCCTTCTGGTGCTATTGCAGCTGTTTTTCATAATTCTTTATCTCACTCAAAGCAGCTTGGTAA CTCAAAAGTGAAACCATTAGAGCATCTGATGGTATATACACCGTCAGGTCATGTAGTTCAACATCAACTTCTGCCATCTGTTGGTCCAGAACCAAGTGAA TGTGGTTTGAGAACCCAGTCAGCTTCAAACCTGCATATGCAAGAGGATGAATTCAGAGTAAAAGTTGAACCAATTCAGTGGTGGGATGTATGCAGAAGGT CAGAATGGCCAGAAAAATGGGATCCTTGTGGCAATACTGTTGATAGACAAGATGGTATTGTTCAAGAGAAAATGTGTTCTGCTGATGGCTATGGATTGGA TTTTTGGGATATAAGTCGTGGTGTTGGGGAAAAAGTGGTAAAGCATTCTACAGGGAAGCCTCAAGATAGATTTCATGGGTATCTATCTAATGCAGAGGTG CAAGTGAATTTTGGAAGGCTGCAAATATGGCAAAAGCCTAAGATTTACTTCTATGCAATGAATTCTGTGAGAACTGGTTTTAGTGATGGTGGAGAGTTTG AAATCGAAAAGATCTCTGCTAATAAAGTTGAAATAAGACAGAAGGAGTTGTTGCCTGTCTTTGACCATTTTCATAGCATCAGACCAAGCTGGAATGACAG AGACCATGCTGGGGAAAAATATTTGAACCTTGCATCTCCGGTTTCCTATCAAGCTGAAGGCAGGCAAACTGCTGACATGACAGTTATTTGTCACTCAAAG CCAGCATCCCTGAGTTCCACTGAAAGCTCTGATGGAGGTTCATCAAGAAGGATCGAAAATTTGATTGACCTGGATCAAATTTCTCCTACTTGTCAAGTAT TTGGTGAGATCTACCTAGAAAGAATGGGGGCAATCAATGTTGAACCTTCGCTGCAAAACAAGGCTGTGCTGGAAAATTTATCTCTATCTGGGAACCTGAA ACATGAGGATTCTCAATATGACTATTGTCTTGATAACAGACCATTATTGCAAGGGAGCAAGATAACTTATTTAAAGGGAGATACTTCAGAAGATGTTGGT ATCAGTGAGGCCTCAACATTTGTCCTGAAACATGCTTCAGATAAGAGTGAGCCTATAGAAGTGATCCCAGTAATGCAAAATGCATGTGATAGTCAATCAT TTCCGGATAGGCAGTGCAAAACACCGAGGCACAAGGGAGGTAACGTGTTAACTGAAGTAGTAGCTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAT AGAGCAACCAGAGGAGGACGGGGAGAATGATGAATTCCTTGGTGGCTTGTTCGCCTTTTCTGAATAAGGAGTAAAGAGCAGGTGACAGCATCAATGAAGG TGTGTGATCATCTTTGGTAGCTGGAGTCTCAGTTAGGAATATGTACAAAGCAATATGTGAATAAGAAATGATAAAAGAGCAACATATTAGGCTGATTTGT TGCTATATCATGTGACCTCTCTCTCTCTCTCACTTTTGTACATTTTGTAAATAGGAAATCATATTCTATTCACGGGTTTGCTTACATTGGGGCTTATCAT CTATATGTTGGGTTTGGATTCCTCCTAAGCTCATTTTTTTAATCAATCTTGCATCTTAATTGTGGATTGGGTATGGCATGGTATTTGTGTAATGCATATT TTTTAACACTTGAATTTGGCAAGGAAAATATGAATGGAAGTTGTAAAAGGTCAGTTAAATTTTCATCATGTTTTACTT
• Tissue: pods
• Gene name: LI_gene_181253;
• Additional information: details;

Expression of Ll_transcript_388174

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.4
• PS2: 0
• PS3: 0.2
• PW1: 1.3
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388174

• Blastp: Autophagy-related protein 18g from Arabidopsis with 52.11% of identity
• Blastx: Autophagy-related protein 18g from Arabidopsis with 54.95% of identity
• Eggnog: Breast carcinoma amplified sequence(ENOG410XSW7)
• Kegg: Link to kegg annotations (AT1G03380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441802.1)
• Pfam: Breast carcinoma amplified sequence 3 (PF12490.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;